Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1460 ATGAAAGGGGCAATTGGTGAGGGGAAGGAGATGATTAGCCCAATGTTTCCTAGGTTGCATGTTAAAGATGCAGAGAAAGGAGGGCCAAAAGCACCTCCAAGGAATAAGATGGCTCTCTATGAACAATTCAGCATCCCTTCTTCTCAAGGTCAATTTGCATCATCAGAATCAGGATCACCATCCTTGTTTCCTCTCCTGCTAAGAAACTGCACACTTCCTCCAACATCTACCCAACAGGGTAGTTTCCTCACTAGTAAGAATTCCCTGAAAACACTTGGTGAGGATGCTTTTATGACTTCTGGTTCTGCCTGTGAGAGAAATTCAAGCTGCGGCATCATTCAAAATGATAAAGATGATGATAAACTCGCAAGAAATAATTTGAACTGTTCGCTCAAAAGTCTACACTCATTTAGAAACAAGGTGAATTCATCTGAAGCCATAGATCTGAATTCAGCAAAATATGGGAAGAACCAGATGGAAGAGCCTATAGTTGTGAGACAAATTGGTCTGAAGCCAGAGGAAGGGCCTCCTCACCCATTAGATGGTTTTGGTGATATGAGAGATGATGAATCCTTAAACTCATTGGTGAAAGGAAGGAGTTCTACGTCAATGAAGAGAGAACATGGATCATTGAAAGGAGAAATTAGAAGTATTTCAGTAGATAGCTTAAAAACATTGCAAGGTAGGAATGTTCATACACATGAAGAGCATGCAGCTTTTGAGGACAATAAAGATGAGGAGGCTTATAGGGATCATGATACCTTAAATAAACCAAGTTCAGAATGTTTGTTTGGGAGGGATATTTCCCCTGACAGTGTTGTAGGAGTTATAGGTGAAAAGGAATTTTGGAAAGCAAGAAGAACTATCATCAATCAACAGAGAATCTTCCTCATGCAAGTGTTTGAGCTCCACAGACTGATAAAGGTTCAGAGATTAATTGCAGAGTCACCCCATTTATTGCTTGGAGATAACTCAATGCTTAACAAGCCACAACTGAAAACATCATCTTCAACCAAGAAATTACCATCACCATCCACAGTTATTAAACTCGAAAGCAAGTCTGAGAGAACCTCTACTCCTGAGCCTGCTAAAAACAATGCAATTGGGATGTTTCCACTTCCTTCTCCAATCAACAACATCATGAGCAAAAGCCACAGTAACCAGTTATCAAATTATAGCCATCATTTAGATATAAACTCCCCAAGCTGTGTCTACCCTCCAGTTCCACCAGTAAACCAGTGGTTAGTTCCTGTCATGTCCCCATCTGAAGGCCTTGTGTACAAGGCAATCATTGCTCCAAATGCAGGCTTCATGGCACCGCCACCAACACCACCACCACCACCAATCATTGCTTCATCTTTACCCCAGTTCTTACCACCACCATCATTAATGCATCATCCTTCTATGTCTGTTGAGAAAATGGGGCAGTCTAATGGTCCTGATCAGAACCACCACTCCTCTGGAGAGGTCAATTCTGCCATGTTATACCGGAGCTCATCTAACCTGTCCACGCAGACTAGCCGAGTGATGTCGAGAAATATTTTAACTCATCATTCAGTGGAAGATAAAGAATTGCAGAGAAGTACAGCTAGTAGTCCTCCTTCCAAGAAGATGAAAGGAGATGAACTTCCTTTGTTTCCTGTGGAACCGACATCTCGGCTATCAGCAGAACAGAACACACCTGTTGAAAACCTCCCGCGAGTGATCAAAGCTCTTCCTCATAATCCCAAATCAGCTACTGAATCAGCAGCCAGAATATTCAGGTCACTACAAGAAGAAAGGAAATATTTGTAA 1794 0.4186 MKGAIGEGKEMISPMFPRLHVKDAEKGGPKAPPRNKMALYEQFSIPSSQGQFASSESGSPSLFPLLLRNCTLPPTSTQQGSFLTSKNSLKTLGEDAFMTSGSACERNSSCGIIQNDKDDDKLARNNLNCSLKSLHSFRNKVNSSEAIDLNSAKYGKNQMEEPIVVRQIGLKPEEGPPHPLDGFGDMRDDESLNSLVKGRSSTSMKREHGSLKGEIRSISVDSLKTLQGRNVHTHEEHAAFEDNKDEEAYRDHDTLNKPSSECLFGRDISPDSVVGVIGEKEFWKARRTIINQQRIFLMQVFELHRLIKVQRLIAESPHLLLGDNSMLNKPQLKTSSSTKKLPSPSTVIKLESKSERTSTPEPAKNNAIGMFPLPSPINNIMSKSHSNQLSNYSHHLDINSPSCVYPPVPPVNQWLVPVMSPSEGLVYKAIIAPNAGFMAPPPTPPPPPIIASSLPQFLPPPSLMHHPSMSVEKMGQSNGPDQNHHSSGEVNSAMLYRSSSNLSTQTSRVMSRNILTHHSVEDKELQRSTASSPPSKKMKGDELPLFPVEPTSRLSAEQNTPVENLPRVIKALPHNPKSATESAARIFRSLQEERKYL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1460 597 MobiDBLite consensus disorder prediction 1 36 - -
Lja3g1460 597 MobiDBLite consensus disorder prediction 327 364 - -
Lja3g1460 597 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 451 597 - -
Lja3g1460 597 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 78 - -
Lja3g1460 597 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 77 440 - -
Lja3g1460 597 PANTHER PROTEIN EARLY FLOWERING 3 451 597 IPR039319 GO:2000028
Lja3g1460 597 PANTHER PROTEIN EARLY FLOWERING 3 1 78 IPR039319 GO:2000028
Lja3g1460 597 PANTHER PROTEIN EARLY FLOWERING 3 77 440 IPR039319 GO:2000028
Lja3g1460 597 MobiDBLite consensus disorder prediction 324 368 - -
Lja3g1460 597 MobiDBLite consensus disorder prediction 471 488 - -
Lja3g1460 597 MobiDBLite consensus disorder prediction 457 488 - -
Lja3g1460 597 MobiDBLite consensus disorder prediction 517 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1460 Lja-Chr3 15449390 15453189 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1460 K12125 - gmx:102663657 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1460 3 15449390 15453189 Lja3g1460 3 15449390 15453189 ECH