Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1456 ATGCACGGAGGCGGAGGAGACTTCCCGTCGCCGCAGCCCCCAAACAGCGGCGAGTATCTCCTCTCTCTCATCCAGAGACCCCACCACCACCACCACCCACAACAACCAACCGCGCCGCCGCCACCTCAACAATCACCGGCCATCGATCCGGCCGTCGCATTCATGGGCCCTTCGATCCCCGTCGCCGCGTCCCCATGGCAATCCAACGGCCTCGATCATCCCCAGCCTCATCCTCATCACCACCACCATCATCAGCATCTTCCTCCATGGTCACACACTCCCCCTTCACCTTACCCGCCGCAAAGCTTCTTCGGGTTGCCCCATAACCCGTTTCCCCAACCTCGCCCCACCGGAAACCACTACCCCGCCGCCGCTGCCCAACTTCACTACAACAGCGGCGCTGCTCTCAGTGACGATCTGCGCAGATTAGGGTTTCCAATTGAAGGAAACGATAAAAGCACTTTCGTTCAGCAACAGGAACTGAAGTTGAAGTTCGGGTCTCTACCCTCTGTTTCGTATGCTTCTTCCCCTGAAGTTCCATCCAATGGCGATTCCTTACCCAATTTGAAGTTCGATAATGGGTTTGATAGGAACTTGCACGTTGACCCCAAAAGTGGTCCGAATAACCATGGTGTTGTTGGGGGTTATAGGGTTTTAGGGTCAGCTCCTGAAACAACTAGACCACCACCACCACCTGGGTTTGGGAACAAGTCAAGGGGAACAGGCTATTGGGGTTCTGGCACGACTAGAAAGGGTTCAGAGGTTGGTGAGGATAGAGGGTTAGCGGTTGGTTCAGGTGAATTTGGTGCTAGGAATGAGAACTTGCACTCTAAGAAGGAAAGTGGAAGAATGGGGTCTGGTGGAAGGAGTAACACCAGAGGCAATGTGGCACGTGAAGTGGGGCTCCCTGATCAGATTGATCACCCTGGGCCGCCGTCCGGGAGTAACCTCCATTCGGGCTTGGGTTCCGGTATTGAAGAGTCTAGGTCTAGTTTAAACCGGGTCGGCGTTGTTGAAGATGGTGTTAGTGATAAGCATATGGGAGTTGGTAGCCGAGGTGGAGCTGATGTTGATCTCCTTGGGGAGCAGATTGTTGAGTCCTTGCTGCTTGAGGATGAGTCTGATGACAAGAATAATAACTCGAAGCAACGCCGTACCCCTCGGGAGAAGGATGCTAGATTATTAGACTCAAGAGGAGAGCAGATGCTAAGCCAGCGGGGAAGAATGTATAAGAGACAGATGATGTGCCGAAGGGACATTGATAGTTTTAATGGTTCTTTCCTTGCAATATATGAATCCTTAATACCTCCTGAAGAAGAAAAGCTGAAGCAAAAGCAATTATTAGGTGTACTGGAGAATTTAGTTAGCAAGGAGTGGCCGACTTCCAAGCTTTATCTGTATGGATCATGTGCTAATTCATTTGGTGTTTCAAAAAGTGACATTGATGTTTGCCTTGCTATTAAGGAAGCAGAGGACAAATCTAAGATTATAATGAAATTGGCAGATATTTTGCAATCAGATAACCTGCAGAATGTGCAGGCGTTGACACGAGCTAGGGTTCCTATAGTAAAGCTCATGGACCCAGCTACAGGAATCTCTTGTGACATATGCGTCAACAATATCCTCGCTGTTGTAAATACAAAGCTTCTTCGGGATTATGGACTCATTGATGCAAGGTTACGGCAGCTGGCTTTTATTATTAAACATTGGGCTAAGTCAAGAGGAGTGAATGAAACTTATCATGGGACCTTATCTAGCTATGCGTATGTGTTGATGTGCATCCATTTTTTACAACTGCGAAGACCTGCTATCCTTCCATGCTTACAGGAGATGGAGTCAACATACTCTGTGACTGTGGATGATACTTATTGTTCTTACTTTGACCAAGTTGACCGCCTTTGTAATTTTGGTCGAAATAACAAAGAGACTATTGCTCGTCTTGTGTGGGGATTTTTCTATTATTGGGCCTATTGTCATGATTATGCAAATACTGTTATATCTGTACGTACAGGAAGTATACTCAGCAAGCGAGAGAAGGATTGGACAAGAAGGATTGGTAATGATCGCCATTTGATATGCATAGAAGATCCTTTTGAAACTTCTCATGATCTGGGTCGAGTGGTAGATAAACGTAGCATCAAAGTTCTGAGGGAAGAGTTTGAACGTGCTGCTGATATTATGCAAAATGATCCAAATCCATGTATCAAACTTTTTGAGCCTTATGTTCGTAGTTGA 2235 0.4729 MHGGGGDFPSPQPPNSGEYLLSLIQRPHHHHHPQQPTAPPPPQQSPAIDPAVAFMGPSIPVAASPWQSNGLDHPQPHPHHHHHHQHLPPWSHTPPSPYPPQSFFGLPHNPFPQPRPTGNHYPAAAAQLHYNSGAALSDDLRRLGFPIEGNDKSTFVQQQELKLKFGSLPSVSYASSPEVPSNGDSLPNLKFDNGFDRNLHVDPKSGPNNHGVVGGYRVLGSAPETTRPPPPPGFGNKSRGTGYWGSGTTRKGSEVGEDRGLAVGSGEFGARNENLHSKKESGRMGSGGRSNTRGNVAREVGLPDQIDHPGPPSGSNLHSGLGSGIEESRSSLNRVGVVEDGVSDKHMGVGSRGGADVDLLGEQIVESLLLEDESDDKNNNSKQRRTPREKDARLLDSRGEQMLSQRGRMYKRQMMCRRDIDSFNGSFLAIYESLIPPEEEKLKQKQLLGVLENLVSKEWPTSKLYLYGSCANSFGVSKSDIDVCLAIKEAEDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPATGISCDICVNNILAVVNTKLLRDYGLIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHFLQLRRPAILPCLQEMESTYSVTVDDTYCSYFDQVDRLCNFGRNNKETIARLVWGFFYYWAYCHDYANTVISVRTGSILSKREKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKRSIKVLREEFERAADIMQNDPNPCIKLFEPYVRS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1456 744 MobiDBLite consensus disorder prediction 90 117 - -
Lja3g1456 744 SUPERFAMILY PAP/OAS1 substrate-binding domain 559 730 - -
Lja3g1456 744 CDD NT_PAP_TUTase 445 554 - -
Lja3g1456 744 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 73 743 - -
Lja3g1456 744 MobiDBLite consensus disorder prediction 1 121 - -
Lja3g1456 744 Pfam Cid1 family poly A polymerase 644 702 IPR002058 -
Lja3g1456 744 PANTHER POLY A POLYMERASE CID PAP -RELATED 73 743 - -
Lja3g1456 744 MobiDBLite consensus disorder prediction 316 330 - -
Lja3g1456 744 Pfam TUTase nucleotidyltransferase domain 439 536 IPR045100 GO:0016779
Lja3g1456 744 MobiDBLite consensus disorder prediction 219 331 - -
Lja3g1456 744 SUPERFAMILY Nucleotidyltransferase 420 554 IPR043519 -
Lja3g1456 744 MobiDBLite consensus disorder prediction 370 393 - -
Lja3g1456 744 Gene3D Beta Polymerase, domain 2 444 556 IPR043519 -
Lja3g1456 744 Gene3D - 557 725 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1456 - - adu:107475742 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1456 3 15392169 15398007 Lja3g1456 3 15392169 15398007 ECH