Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1450 ATGAACGACAACGACGATGAACACTGCGAAGAAGGGCTTAGAAAGTCACAGTTTTGCTGCATTTCACACCAGTTCCTACAAATAGCCTCCGCAAACCCTAACAAAATCGCAGTGATTCATGCTTCTGGCGTCGCCCAAATTTCCCGCGAAAAATCGACCACCCCCAACTCCGACGACGACATCACCACGCTCCTTGAACACCGCGTTCATTCCACGTCGCCGCCACTGTACCACGGCGACCGTTACTTCACATACACTCACGTCTTGGAAGTGGTTCGTTCCCTCAGCCATCGCCTCCGCTCTATCCTGCTTGGTGCGGATGATCCCCACTTGATCAAAACCATACCTCAAGGTAGCAATGATGTCAGCTGTGAAGAGGGAGCTTTTCAGACGTCCGAGTCCTCGGAAACTGTCGTGCCGGGTGCAGAGCCAATGGCTGACTCAGGTGAAGAGTACAGGCCGAAGATTGTGGGGATTTATATGCCTCCTTCTGTTGAGTATGTTGTTGCTTTCCTTTCGGTACTTCGGTGCGGGGAAGCGTTCTTGCCTCTTGATCCGTTTTGGCCGAAAGAAAGGATATTGTCGGTTGCTTCTTCTTCGAACGTTGATCTCATTATAGGGTCGTGGTCTTCGTTTGGTAAAAGTAACTTGGATGATCTTGACGAATCACATTGGCTGGTGAAGTCGGTTAATTGTCCTGTTTTGAACTACTCCATTGAAGAAAACGTTCAAGAATCTGGTTGTTCGTCAAATTTGGCGTGGCCTTGTGCCAGTGAAAAGAAGAGGTCATTCTGTTATTTGATGTACACTTCTGGGTCAACTGGAAAGCCTAAAGGAGTATGCGGCACTGAACGAGGTCTTTCAAATCGATTTTTATGGATGCAAGGAATGTACCCTTTGACAGGGCGGGAACTATTATTGTTTAAGTCATCAATTAGCTTCATTGACCACCTGCAAGAATTTCTCAGTGCCATTTTGACTGCTTGTGTACTAGTTATTCCTCCTTTCAGAGAGCTTAGAGAAAATGTGTATTCTATAATAGACTTTCTGCAGGCTTATTTTGTTAACAGGCTTACAGCTGTTCCATCACTAATGAGGACAATTCTTCCTGGATTGCAAACTCATGCTGGCATGCGGATTGAAAGTTCATTGAAATTGCTTGTGCTAAGTGGTGAAACTTTTCCCCTGACCTTGTGGGAGATGCTTTCAACTATATTACCAAAGACATCAATCTTGAACTTATATGGTAGTACTGAGCTGTCTGGCGATTGTACATATTTTGATTGCAAGAGGATGCCGTTGATTTTGAAGGAAGAAATTCTAACTAGTGTTCCAATAGGTTTACCTATTACTGACTGTGATGTGATGCTTGTTGGTGAAAATGATGCATCAAATGAGGCAGAGCTATATGTTGGCGGTTCTTGCATTTCTAGGGGCTACTATAATGAATCTAATATAATGTCTGATGAATTTGTAAAATTACCTCAAAGTTATTGTTGTGGAGATTCTTCTAATGCTTTTCAAGGCCAATTGTACTTCAGAACTGGCGATTTAGTCAAACAGTTGCCAAGTGGTGATTTTATATTCTTGGGAAGAAAAGACCGCATTGTAAAAGTCCATGGACAGCGTATTGCCCTGGAAGAAGTTGAAAATTTTCTAAGGGAACATCCATATATAAATGATGCTGCTGTAATTTGTCGAAATCTTCAAGCAGAGCTTGTGCTTCTTGAAGCCTTTATAGTTTTGAAGGACAAGAAAAGATTGGGTGAACTTTTGATTCCTGAAATCAGAAGTTGGATGATTAACAAACTTCCATCAGCTGTGCTTCCTAACCGTTTCATCTTTATAGAATCATTTCCTTTGTCTTCTAGTGGTAAGGTTAATTATGAGTTGTTGGTTAGCTCAGCATTATTGACAAAAGATGTCAAGGATAAGGTTGGTCACATTGGCTGCAGCAATCTTCTGCAACTTATTATAAAGGCCTTTCATGACACTCTAATGGTTGAAAAGGTATGCAATGACGGTGATTTCTTTATGATGGGTGGAAACTCTATTTCTGCTGCACATGTTGCTCACTATTTGGGGATTGACTTGAGACTTCTTTACTATAACCCAAGCCCTTTTAAGCTTTGTATGGCTCTTCTCCAGAAAAGAGGATCATGCCCTTTGCATAACAGCCTAGATCATTGTTTGCAGTTACATACAGACGGACAAAATAACCATTTTTCTTCCAATCATACTGAAAAGTTAATTCCTCTTGAGTCGAGGATGATTTCTGAAGGTAATCAAGATGACTTATTTCCTTCTAAACGCTTAAAGAGGGATTCTCCAAATGTTTCTTCATCTCCAGACGTTACCTCAGGGGATAATGAATTATTCAAATGGTATTCCCCTTCAATATTCTTATCATCTTCATTTAGCCGATGCAACAAGGTGTTGTATAAAGAGAAACCTGAAGTAACTGTCAAACGCCAAACAGCTTTGTCTGACAATGTTCCAAGAGGTTGCAGAGGTCACTTGAAAAACTTCTGGAAAGTTTACATGGAATCCTGTGTTGATGCTTCCCCAGTGCTTGTGTTTAAAGGCCCAGACATTTATTTGTTCATTGGATCTCACGCACATAAATTTCTCTGCATAAATGCCAGAAGTGGTTCTATCCAGTGGGAGATCAAACTAGAAGGACGCATTGAATGCACAGCAGCAATTGTTTCTGATTTTTCTCAGGTTGTTGTTGGATGTTACATGGGAAAAATATATTTTCTTGATTTTTCAAATGGACACATCTGTTGGATTTTTCAAACATCTGGTGAGGTAAAATCACAACCAGTTGTGGACACACGGAGACACTTGATCTGGTGTGGCTCACATGATCATAACTTATATGCTCTTGATTACAAAAACCATTGCTGTGTCTATAAGTTACCATGTGGAGGCAGTATATATGGGTCACCTGCAATTGATGAGGTTCGGGAGTTGCTTTATGTGGCCTTTACCAGTGGTCGTATAACAGCTGTATCGATATCTGCTTCTCCATTTAATATACTGTGGCTACATGAATTAGAAGTCCCTGTGTTTGGTTCTCTGGCTGTCACCCAAAATGGATCAGTAATATGTTGCTTGGTGGATGGCCATGTTCTCGCATTGGATCCAAACGGATCCATAGTTTGGAAGAAAACAACTGATGGTCCAATATTTGCTGGGCCATGCATACCTTCTTCTCTTCCTCATGAGGTGCTTGTATGCTCCAGAAATGGAAGTGTATACTCGTTCAAACTGGAGGAGGGGGATCTACTATGGGAATACAATGTTGGAGCTCCAATTACTGCATCTGCTTATGTTGACGAGCACTTGCAGCTGGAGCCTGATGCCTCCCAATCTTCAGACAGGTTAATTTGTATTTGTACCAGTTCTGGAGGCATACACGTTCTTCGAGTGAACATGAATTTCTCGGAAGATAAAGAACAACACACAAGTGGTGTGCAAGAATTTGCAAGACTAAACTTGCAGGGTGATATATTTTCGTCGCCATTAATGATTGCTGGCCATATTTTTGTTGGTTGTCGTGATGATTACTTGCACTGTGTTGCCCTTGAAATTCCAAAGCAACATGATAGTTCAAAGCTTGTGTAA 3630 0.4154 MNDNDDEHCEEGLRKSQFCCISHQFLQIASANPNKIAVIHASGVAQISREKSTTPNSDDDITTLLEHRVHSTSPPLYHGDRYFTYTHVLEVVRSLSHRLRSILLGADDPHLIKTIPQGSNDVSCEEGAFQTSESSETVVPGAEPMADSGEEYRPKIVGIYMPPSVEYVVAFLSVLRCGEAFLPLDPFWPKERILSVASSSNVDLIIGSWSSFGKSNLDDLDESHWLVKSVNCPVLNYSIEENVQESGCSSNLAWPCASEKKRSFCYLMYTSGSTGKPKGVCGTERGLSNRFLWMQGMYPLTGRELLLFKSSISFIDHLQEFLSAILTACVLVIPPFRELRENVYSIIDFLQAYFVNRLTAVPSLMRTILPGLQTHAGMRIESSLKLLVLSGETFPLTLWEMLSTILPKTSILNLYGSTELSGDCTYFDCKRMPLILKEEILTSVPIGLPITDCDVMLVGENDASNEAELYVGGSCISRGYYNESNIMSDEFVKLPQSYCCGDSSNAFQGQLYFRTGDLVKQLPSGDFIFLGRKDRIVKVHGQRIALEEVENFLREHPYINDAAVICRNLQAELVLLEAFIVLKDKKRLGELLIPEIRSWMINKLPSAVLPNRFIFIESFPLSSSGKVNYELLVSSALLTKDVKDKVGHIGCSNLLQLIIKAFHDTLMVEKVCNDGDFFMMGGNSISAAHVAHYLGIDLRLLYYNPSPFKLCMALLQKRGSCPLHNSLDHCLQLHTDGQNNHFSSNHTEKLIPLESRMISEGNQDDLFPSKRLKRDSPNVSSSPDVTSGDNELFKWYSPSIFLSSSFSRCNKVLYKEKPEVTVKRQTALSDNVPRGCRGHLKNFWKVYMESCVDASPVLVFKGPDIYLFIGSHAHKFLCINARSGSIQWEIKLEGRIECTAAIVSDFSQVVVGCYMGKIYFLDFSNGHICWIFQTSGEVKSQPVVDTRRHLIWCGSHDHNLYALDYKNHCCVYKLPCGGSIYGSPAIDEVRELLYVAFTSGRITAVSISASPFNILWLHELEVPVFGSLAVTQNGSVICCLVDGHVLALDPNGSIVWKKTTDGPIFAGPCIPSSLPHEVLVCSRNGSVYSFKLEEGDLLWEYNVGAPITASAYVDEHLQLEPDASQSSDRLICICTSSGGIHVLRVNMNFSEDKEQHTSGVQEFARLNLQGDIFSSPLMIAGHIFVGCRDDYLHCVALEIPKQHDSSKLV* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1450 1209 Gene3D - 534 644 IPR045851 -
Lja3g1450 1209 Pfam AMP-binding enzyme 156 539 IPR000873 -
Lja3g1450 1209 SMART ire1_9 856 891 IPR018391 -
Lja3g1450 1209 SMART ire1_9 900 933 IPR018391 -
Lja3g1450 1209 SMART ire1_9 1028 1059 IPR018391 -
Lja3g1450 1209 SMART ire1_9 1072 1102 IPR018391 -
Lja3g1450 1209 MobiDBLite consensus disorder prediction 766 786 - -
Lja3g1450 1209 PANTHER EBONY 18 1198 - -
Lja3g1450 1209 Pfam AMP-binding enzyme C-terminal domain 548 626 IPR025110 -
Lja3g1450 1209 SUPERFAMILY Acetyl-CoA synthetase-like 68 633 - -
Lja3g1450 1209 ProSitePatterns Putative AMP-binding domain signature. 267 278 IPR020845 -
Lja3g1450 1209 Pfam PQQ-like domain 926 965 IPR002372 -
Lja3g1450 1209 Gene3D - 822 1009 IPR015943 GO:0005515
Lja3g1450 1209 Gene3D - 1010 1202 IPR015943 GO:0005515
Lja3g1450 1209 CDD A_NRPS 153 632 - -
Lja3g1450 1209 Pfam PQQ-like domain 993 1187 IPR002372 -
Lja3g1450 1209 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 841 1194 IPR011047 -
Lja3g1450 1209 Gene3D - 122 533 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1450 Lja-Chr3 15295996 15325054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1450 266 632 Acyl Lipid Metabolism Gene Families AT5G36880 21.563 2.35e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1450 K00142 - gmx:100820175 1911.35