Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1412 ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACTGCTCTGCGAGGACTGGGCTCGATCATGATCCTATTGGTCCTTGGTGTCGTTGGTGTTACCTACTATGCTGTTGTTGTCACCAATTACGTCCCTGCTTTGTATGCTGGAGGGCTTGATTTTCTTATTTCCATGCTGGTGTTGATCTTGTTTCATGCTTTGTTGGTTATGCTATTGTGGAGTTACTTTTCTGTTGTATTTATTGATCCGGGAAGTGTACCACCAAACTGGAGGCCTAAAGTTGATGAAGAAAGAGGAGAGGCTGACCCATTAGTTGGGTCAGAATTTAGTAATGTGCAGAGTGATTCGTTAAATGAACGGACACGGTATTGCCGGAAATGCACCCAGCTTAAGCCACCTCGATGCCATCATTGTTCAGTTTGTGGGCGTTGTGTGCTAAAGATGGACCACCACTGCGTGTGGGTTGTTAACTGTGTTGGAGCGCTAAATTACAAGTATTTTCTTCTTTTCTTGTTCTACACCTTCCTTGAGACAACTCTTGTGACTGCATCCTTACTGCCACATTTCATAGCGTTTTTTAGTGATGGAGAAATTCCTGGAACGCCTGGATCTCTTGCTACAACTTTTCTTGCTTTTGTTTTGAACCTGGCTTTTGCATTGAGTGTCTTGGGATTTCTTATTATGCACATATCATTGGTGGCTGGTAATACGACCACTATTGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGGTATGATCTTGGTCGTCGAAAAAATTTTGAACAGGTTTTTGGGATGGACAAGATATACTGGTTCATCCCTGCATATTCAGAAGAAGACATACGAAGGATGCCAGCTCTACAAGGTCTCGAGTATCCATCAAAACCCGACTTCGATTCCCAGTAG 918 0.4346 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVVTNYVPALYAGGLDFLISMLVLILFHALLVMLLWSYFSVVFIDPGSVPPNWRPKVDEERGEADPLVGSEFSNVQSDSLNERTRYCRKCTQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAGNTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKIYWFIPAYSEEDIRRMPALQGLEYPSKPDFDSQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1412 305 PANTHER S-ACYLTRANSFERASE 14 299 - -
Lja3g1412 305 Pfam DHHC palmitoyltransferase 121 248 IPR001594 GO:0016409
Lja3g1412 305 ProSiteProfiles DHHC domain profile. 125 175 - -
Lja3g1412 305 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1412 Lja-Chr3 14984021 14988464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1412 8 305 Lipid Metabolism Gene Families AT4G22750 67.000 1.96e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1412 K20028 - gmx:100819811 525.013