Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1410 ATGTCTGGTTGGTCCGCTGAGAAAGCCAAGAGAGCTTATATCCAGGCTCTCAAAATGGCCAAAAAGGGCAAAGAACCTGATGTAGCTGAGTTCATATCTGCCCTTGCAGCAGGCAATAATGCACAGCTCATGGTGGTGGCCAATGCCGGAGTGGCTGGGCCTGCCACACTGGCGCTGGCTGCAGCCGCACACCAGACCGCTGGCCGTGCGGTGTGTGTTTGTTGCGGGGAGAATGAATTGCAAGCATCAAAAAAGGCTCTGGGAGTTCATAGACATGGTCTTGAGTTTGTTGTGGGAGATGCTAAGTGCCTTCTCCTAGGTGATTACAAAGGAGCTGATTGTGTGCTTGTAGATTGTGACATCACTAGTGCAAAGGAAGTTTTTGTAGCAGCATTGAAAGGGGCTAACAAAGATGGGGCAATTGTGGTTGGGTATAATATTAGGCACAGGGCATCAAGGTGGAGGCAATTGAAGGCATCTTTTTTGCCTATAGGAGAAGGGTTGCTAGTGACCAAAATAGATCCAAATAATGTGAAGGATAATGACAATGTTGTTCAAAAAAGGAGGAGCCGTTGGATTGTTCAAGTAGATCATTGTACTGGAGAGGAACACATTTTTAGAGTCACCTCTCCACAGAAGAAAGTGCAGATTGAAGTTTAA 660 0.4667 MSGWSAEKAKRAYIQALKMAKKGKEPDVAEFISALAAGNNAQLMVVANAGVAGPATLALAAAAHQTAGRAVCVCCGENELQASKKALGVHRHGLEFVVGDAKCLLLGDYKGADCVLVDCDITSAKEVFVAALKGANKDGAIVVGYNIRHRASRWRQLKASFLPIGEGLLVTKIDPNNVKDNDNVVQKRRSRWIVQVDHCTGEEHIFRVTSPQKKVQIEV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1410 219 Pfam Protein of unknown function (DUF1442) 4 207 IPR009902 -
Lja3g1410 219 Gene3D Vaccinia Virus protein VP39 5 172 IPR029063 -
Lja3g1410 219 PANTHER DUF1442 FAMILY PROTEIN 1 213 - -
Lja3g1410 219 PANTHER DUF1442 FAMILY PROTEIN 1 213 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1410 Lja-Chr3 14976297 14977188 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1410 - - lja:Lj3g3v2735180.1 327.791