Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1409 ATGAAGCTCGTTTGGTCCCCAGAAACAGCCTTACAAGCTTACCTAGACACTGTTCAATCTTGTGAGAAAGTCAAGGAATCAGGGGTAGCTGAGCTTCTCTCCTCCATGGCAGCTGGATGGAACGCCAAGTTCATCGTCGAATGCTGGTCCCATGGCGGCCCCATCGCGGCTAGCCTCGGCCTCGCGGTCGCGGCTCGCAACACAGGTGCAAGGCACGTGTGCATAGTCAAAGACGAGCTGTCGAGATTGCACTACATGAAGGCCCTCGCCGAGATGGGCGTATCTCCGCCGCAGGAGGTGGTAGTCGGAGAGGCAGCAACGGTGGTGGGGAGCCAGAGCCTCGCCGGACTTGACTTTCTGGTGGTGGATTGCACCGGCAGCAACTTCGCTAAGGTTCTGAGGGTGGCGAAGGTGGGCCCCAGAGGGGCAGTTTTGGCATGCAAAAATGCGTGTCAGAGAAACGGTTACAGGTTGTTCCGGTGGAGCTGGGTGCTTGAGAGAGGCACACGTGTGGTTAGGTCGGTGTTCTTGCCGGTTGGAAAAGGTTTGGATATTGCTTACATAGGGAGTACTGGATCAAGTGGTGCAGCAGCAGCAACAGCTGCAACTGCTTCAAAGGCTCCTAGCCGTTGGATTAAGCACATAGATCAACAATCAGGTGAAGAACACCTTTTCAGAGAGGGGTAG 687 0.5546 MKLVWSPETALQAYLDTVQSCEKVKESGVAELLSSMAAGWNAKFIVECWSHGGPIAASLGLAVAARNTGARHVCIVKDELSRLHYMKALAEMGVSPPQEVVVGEAATVVGSQSLAGLDFLVVDCTGSNFAKVLRVAKVGPRGAVLACKNACQRNGYRLFRWSWVLERGTRVVRSVFLPVGKGLDIAYIGSTGSSGAAAATAATASKAPSRWIKHIDQQSGEEHLFREG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1409 228 PANTHER DUF1442 FAMILY PROTEIN 1 226 IPR009902 -
Lja3g1409 228 Pfam Protein of unknown function (DUF1442) 1 226 IPR009902 -
Lja3g1409 228 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 226 - -
Lja3g1409 228 Gene3D Vaccinia Virus protein VP39 6 188 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1409 Lja-Chr3 14962876 14964540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1409 - - gmx:100791746 327.405