Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1393 ATGTCGATCATAGCGCGCAGAGGCATCCATTACATGCATAAGCTGAATGCACCAAATGTATCTTCTGCTATGCTAGAGAAAGGCCAAAACCGTGTGATTGATGCTTCGCTTACTCTTATAAGAGAAAGGGCAAAGCTTAAGGGTGAACTCGTGCGTGCTTTGGGAGGTGCTGCGGCTACTTCATCTCTTCTGGGAGTTCCATTGGGACATAATTCTTCATTCCTTCAAGGGCCTGCATTTGCACCTCCTCGCATTAGGGAGGCCATTTGGTGTGGTAGCACAAACTCAACAACTGAAGAAGGCAAAGATTTACATGATGCACGGGTGCTAACTGATGTTGGTGATGTCCCTATCCAAGAAATTCGAGATTGTGGGGTAGATGATCACAGATTGATGAATGTCATTGGTGAAGCTGTCAAGATTGTGATGGAGGAGGATCCACTGCGTCCCTTAGTTTTAGGTGGTGACCACTCAATATCATTTCCAGTTATTAGAGCTGTCTCTGAGAAGCTTGGAGGACCAGTTGATGTTCTTCATCTCGATGCACATCCAGATAACTATGATGCCTTCGAAGGAAACATTTATTCACATGCTTCTTCTTTTGCTCGAGTCATGGAGGGTGACTATGTTCGGCGACTCTTGCAGGTTGGTATTAGATCAATAACAACTGAAGGGCGTGAACAAGCCAAAAAATTCGGGGTAGAGCAATATGAAATGCGCACATTTTCAAGAGATCGTCACTTTTTAGAGAACCTGAAACTAGGGGAAGGTGTTAAAGGTGTGTATATCTCCATAGATGTGGATTGCCTTGATCCTGCCTTTGCTCCTGGAGTGTCTCACATAGAACCTGGAGGTCTTTCTTTCCGTGATGTTCTCAACATCCTGCACAATCTTCAAGGCGATGTTGTTGCCGGAGACGTCGTTGAATTCAACCCACAGCGTGATACTGTTGATGGAATGACTGCCATGGTGGCTGCTAAGCTGGTGAGAGAAATGACTGCAAAGATTTCCAAATGA 1017 0.4513 MSIIARRGIHYMHKLNAPNVSSAMLEKGQNRVIDASLTLIRERAKLKGELVRALGGAAATSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKDLHDARVLTDVGDVPIQEIRDCGVDDHRLMNVIGEAVKIVMEEDPLRPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDNYDAFEGNIYSHASSFARVMEGDYVRRLLQVGIRSITTEGREQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVEFNPQRDTVDGMTAMVAAKLVREMTAKISK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1393 338 Pfam Arginase family 62 332 IPR006035 GO:0046872
Lja3g1393 338 PANTHER ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL 4 338 - -
Lja3g1393 338 PIRSF Arginase 55 338 IPR006035 GO:0046872
Lja3g1393 338 SUPERFAMILY Arginase/deacetylase 60 333 IPR023696 -
Lja3g1393 338 CDD Agmatinase-like_2 63 332 - -
Lja3g1393 338 ProSitePatterns Arginase family signature. 264 285 IPR020855 GO:0016813|GO:0046872
Lja3g1393 338 Gene3D Ureohydrolase domain 51 338 - -
Lja3g1393 338 PANTHER ARGINASE/AGMATINASE 4 338 IPR006035 GO:0046872
Lja3g1393 338 ProSiteProfiles Arginase family profile. 52 338 IPR006035 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1393 Lja-Chr3 14739182 14743836 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1393 K01476 - gmx:100789799 620.542