Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1388 ATGTTGCTTGTGACTGGAGTAATGTTATCCAATTATATGACATGTGCCAGAGCTATATCTATTGATCAAATCAGTTCAAGAGCTTCTAAAGTTGGTCTTTCTGCATTCTTTTACAAAACTACATTTGGCCAGAAGCAATGCGCTCCGTGCTTCTCTGTCATTTTTGCTCAACCTTGTTTAATGATCAATTTGAGGAAGATGACTTGGTCAGTTAGAAGCAGCATAAATGACAGCAGTTTTAGTCCTTCCACTTCAAGTGGCACCAATGGAAGGACCCGCATAATCAAAGTTATTCAAGAGTTTCGGACCAAGTTAGGTTCTAAAGTTCAGGAGGTAAAGAAAAATCTTCCGATGAAGCTTCTTTTCTTCTTGGCTGGATTTTATTGTGCAACTGCCTTTTCCACTGTTATTGGACAAACTGGTGATTGGGATATTCTATCTGCTGCCTTAGCTGTGTTTGTTGTGGAAGGCATTGGGGCTCTCATGTACAGTGTTTCTATTCCTTTAGTTATCAAGATTAGGAGCCTGACTGCCATATTTAACTATTGGAAGGCTGGCCTTACAATGGGTCTTTTCTTGGATTCATTTAAATATTAA 597 0.3903 MLLVTGVMLSNYMTCARAISIDQISSRASKVGLSAFFYKTTFGQKQCAPCFSVIFAQPCLMINLRKMTWSVRSSINDSSFSPSTSSGTNGRTRIIKVIQEFRTKLGSKVQEVKKNLPMKLLFFLAGFYCATAFSTVIGQTGDWDILSAALAVFVVEGIGALMYSVSIPLVIKIRSLTAIFNYWKAGLTMGLFLDSFKY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1388 198 Pfam Protein of unknown function (DUF565) 139 197 IPR007572 -
Lja3g1388 198 PANTHER YCF20-LIKE PROTEIN 12 198 - -
Lja3g1388 198 PANTHER - 12 198 IPR007572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1388 Lja-Chr3 14669241 14672308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1388 - - lja:Lj0g3v0008779.2 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1388 3 14669241 14672308 Lja3g1388 3 14669241 14672308 ECH