Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1384 ATGCTACCCACTGGAGCAAAAGACACTCAATTACGTGAGAGCAACAGTCAGAAGGTCCACCCTCAACCCATGGAAGAGGCCATGAATCAGAATCCTGAAGCTATAGAGACCCTAATATCTAAAGTTTTTACCAATATTTCTTCCCTGAAGTCAGCTTACATCCAGCTGCAAACTGCCCATACTCCCTATGACCCTGATAAAATCCACACTGCTGATAAACTTGTTATTAGTGAGCTGAAAACTCTGTCTGAACTTAAGCATTTTTATAGGGAAAACAACCCAAAACCAGTGTGTGTTTCTCCCCAAGACTCACGTTTAGCTGCAGAAATTCAAGAACAACAGAGCCTCCTGAAAACCTATGAGGTCATGGTGAAGAAATTCCAGTCTGAAATCCAGAACAAAGATTCGGAGATTCATCAATTGCAGCAGCAGATTGAGGAGGCTAGCCAGAAGAGAGCCAAACTAGAAAAGAATCTGAAGCTTAGAGGTTTGTCAACCAAGGAATCAGAAGATGAAAGTGGATTTTTCCCTGTTGATCTAACTCCAGATCTCTTCATCTCTTCAGTGGAAGCAGCTGCAAAAGCCATTCATGATTTTTCTAAACCTTTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGATTCTGCTGCCAACTCAATTGAACCTGATGTTGTTTATGCGAAGAGAGCTCATAAGAAATATGCATTTGAGTCTTACATATGCCAAAGAATGTTCGGTGGCTTTGAGCAGGAAAGTTTCTCTGTCAAATCAGACAGTATTACAGTTACTAAAGAGAGCTTCTTCCACCAATTTCTTGCTTTAAGGGAGATGGATCCCTTGGACATGCTAGGGCAAAATCCTGATTCCATTTTTGGGAAGTTTTGCAAGAGCAAATACTTAGTAGTGGTTCATCCAAAGATGGAAGTGTCATTCTTTGGAAATTTAGATCAGCGAAATTATGTGACGGGTGGAGGGCATCCAAGGACTCCTTTTTACCAGGCTTTTCTGAAACTGGCCAAGTCAATTTGGCTTTTACACAAGTTGGCCTATTCTTTTGAGCCAAATGTCAAGGTATTTCAGGTTAAAGGAGGTAGTGAGTTCTCGGATGTATATATGGAAAGTGTGGTCAAGAACCTGATAATGGATGACAATGATGAAAAGCCCAAAGTTGGGTTGATGGTAATGCCTGGTTTTTTGATTGGAGGTAGTGTGATTCAGAGTAAAGTGTATCTCTCTGGTATGAAGGTAGCTGAATGA 1260 0.4127 MLPTGAKDTQLRESNSQKVHPQPMEEAMNQNPEAIETLISKVFTNISSLKSAYIQLQTAHTPYDPDKIHTADKLVISELKTLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQQIEEASQKRAKLEKNLKLRGLSTKESEDESGFFPVDLTPDLFISSVEAAAKAIHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRAHKKYAFESYICQRMFGGFEQESFSVKSDSITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCKSKYLVVVHPKMEVSFFGNLDQRNYVTGGGHPRTPFYQAFLKLAKSIWLLHKLAYSFEPNVKVFQVKGGSEFSDVYMESVVKNLIMDDNDEKPKVGLMVMPGFLIGGSVIQSKVYLSGMKVAE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1384 419 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 414 IPR040225 GO:0009639|GO:0009959
Lja3g1384 419 Coils Coil 110 158 - -
Lja3g1384 419 MobiDBLite consensus disorder prediction 1 25 - -
Lja3g1384 419 MobiDBLite consensus disorder prediction 8 24 - -
Lja3g1384 419 Pfam Plant protein of unknown function (DUF641) 31 157 IPR006943 -
Lja3g1384 419 PANTHER MYOSIN-4 PROTEIN (DUF641)-RELATED 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1384 Lja-Chr3 14643622 14644881 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1384 - - gmx:100499972 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1384 3 14643622 14644881 Lja3g1384 3 14643622 14644881 ECH