Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1352 ATGGAGGTGGAGAGTGAAAAACCAGGGTCTGATGTCAAGGGTTGGAGTTTTTGTAGAATGCCTTTTTGGCAAACAAACAACCACATTCCACCATCATCTTCTTCTTCCACCACATCTTACATGCACAATGGCCATCACCAAAACATCAGTTTTCAGTCTGTTGATAGATCCACTCATCAGGCTTCACCCACGGTTTCTTCCGTGGCTAAGTCTCTGCTTCCTACTAGGAGGAGGCTCCGTCTTGATCCTTCCAACAAGCTCTACTTCCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATTGCAATTAAAAACACTTGCAAGACTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATTCTTTCTCCTGGTGAAAGTATAATTGCCACTGTATTCAAGTTCGTGGAGCCACCAGAGAACAATGAGAAGCCGCTTGATCAGAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTAAAAGTGCAAGGTGAAACGGACTACGTACCAGAACTGTTTGATGAGCAAAGAGATCAAGTAGCGGTGGAGCAAGTTCTGCGGGTTATATTCCTGGACCCTGAACGGCCTAGCCCTGCCATGGATAAGCTTAAGCGGCAGTTGGCCGAGGCTGAGGCTGCACTGGAATCACGAAAGAAACCCCCAGAGGAGACAGGTCCTCGAGTAGCTGGGGAGGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTCGCCCGGCAGCAGGTCGAAGGTGTTGATTCAGTGTAA 801 0.4657 MEVESEKPGSDVKGWSFCRMPFWQTNNHIPPSSSSSTTSYMHNGHHQNISFQSVDRSTHQASPTVSSVAKSLLPTRRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKTHVAFKFQTTAPKSCYMRPPGGILSPGESIIATVFKFVEPPENNEKPLDQKSKVKFKIMSLKVQGETDYVPELFDEQRDQVAVEQVLRVIFLDPERPSPAMDKLKRQLAEAEAALESRKKPPEETGPRVAGEGLVIDEWKERRERYLARQQVEGVDSV* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1352 266 MobiDBLite consensus disorder prediction 216 234 - -
Lja3g1352 266 Pfam MSP (Major sperm protein) domain 79 189 IPR000535 -
Lja3g1352 266 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 200 IPR000535 -
Lja3g1352 266 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 35 265 - -
Lja3g1352 266 SUPERFAMILY PapD-like 67 208 IPR008962 -
Lja3g1352 266 MobiDBLite consensus disorder prediction 216 242 - -
Lja3g1352 266 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 35 265 IPR016763 GO:0005789
Lja3g1352 266 Gene3D Immunoglobulins 74 204 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1352 Lja-Chr3 14117203 14120883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1352 - - gmx:100816998 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1352 3 14117203 14120883 Lja3g1352 3 14117203 14120883 ECH
Lja3g1352 3 14117203 14120883 Lja3g1352 3 14117203 14120883 PCT