Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1345 ATGAAGACTCAGAAACCCCGTCAACACCGCAACCGCGAAGCCGGTTCACGCTTCACATCCTCGCCGGACCACTCACTCACCACCACCATAGAATCCATCGAATGCAATTCCCCTGCTCGACGCTCAACCGACACCCGTCGACACCACAAAATCACAGAGGACACAACCCTCACGCGCCGCCAACTCTGGCCTTCTACGGCGAAGAAAAACTCCGGCACCACCACCCTCGCCGATCACATCACCGAAGACAGAATCATCGAGCAACAACTCGATAACAAAAAAGAGAAATCCATCAGATTCTACTCCCATAGGGTTTCTAGCTCTGCAGGGTTTAACGATGTAACAACAGCGAGTAACACCTTCAAGGAAAACGATCAACAACAACACGGTTCAGCTAGATTCTCAGGAAGATTTTTTGCTTCTTCAATTGGAGAATCATCACCTTCTTCTTCATTGAAGAAACAGGCTAATTCTGGTTCTGGTTCAATTCGTTCCACCATTGTTCCGGGAAGATTATCTCTCGATGAGAGAGCTAAACCTATCTCTTCTTCGAGGAGAATGTTGAATTCTCTTGATTTGGAATCTCAATCTGGTGATTCTGGGAAAACTTTGAGTCCAAGAAAATCAACAGGGGTGGAGGTTAAATCCAGGTTCAGGTCTAGAAGGGGAGCTTCGGATTCGAACATTGGGAATTTGGATGGTGATTCTTCTTCTGCGCTGAAGAAATCGGTTTTGAAATCGGCGATCAAGAGGGCTAATTCACTTGCAGGTTATAAGAGTTCTAAGTCTCAATGGGCTTTATCACCAGGAAGATCAGATTCACCTGCTATGTCAGTAGAAAACATGGAGAAACCAGTGTTGTTTTCAACTCCAACTAGTCCTGCTCCTTTTACCAAGGTGAAAGGAGTGGAGAAAATCCTCAATTTGGGTTTTGATTTCTTTAAAACTAAGAAATCATCTGTGGTTAATTCATCGCCTCTCGCTTTTGGAAACTCGGAGAATGTGCACCGGCTTCGTCTGCTTGATAATCGGTTGATTCAGTGGAGGTATGCAAATGCTAGAGCTCAAGTAGTGAATGCAAACATTTCTCATCATGCTGAGAGCAATTTGGTATGTGCTTGGGATACTCTCACAAAGTTGCGACAATCTGTTCTGAAAAAGAAGATACAATTTTACAGAGAAAAACTTGACATGAAGGTTGCTTTTATATTGTATTATCAAATGAAATTACTAGAAGCTTGGGGAGGTACGGAAAGACAGCATGTATCAGCACTTAATGTGACCAAAGAGTGTTTGCATTCTGTTGTTTGCAGAGTTCCTCTTTTGGAGGGTGCTAAGGTGAACTTGCAATCAACATCCCTTGCCTTGCGGCAAGCATCTGATCTCACATCTTCCATCAAGTCAATACTAACAAGTTTTTCACCTCCACAGATTGATAAGACTGCTGCAATGGTATCAGAATTAGCAAAAGTTGTAGCACTAGAGAAACAACTCATAGAAGAATTCTATGATCTTTTCCAGGCCACATCTGTCTTCGAGATTCAAGAAAGCAGTGTGAAATGCAATCTCGTTCAGCTTGAAAGTTGGCAGCAGAAATATAAACAGCGACAATTACTATCAGAGATCACTACATAG 1635 0.4306 MKTQKPRQHRNREAGSRFTSSPDHSLTTTIESIECNSPARRSTDTRRHHKITEDTTLTRRQLWPSTAKKNSGTTTLADHITEDRIIEQQLDNKKEKSIRFYSHRVSSSAGFNDVTTASNTFKENDQQQHGSARFSGRFFASSIGESSPSSSLKKQANSGSGSIRSTIVPGRLSLDERAKPISSSRRMLNSLDLESQSGDSGKTLSPRKSTGVEVKSRFRSRRGASDSNIGNLDGDSSSALKKSVLKSAIKRANSLAGYKSSKSQWALSPGRSDSPAMSVENMEKPVLFSTPTSPAPFTKVKGVEKILNLGFDFFKTKKSSVVNSSPLAFGNSENVHRLRLLDNRLIQWRYANARAQVVNANISHHAESNLVCAWDTLTKLRQSVLKKKIQFYREKLDMKVAFILYYQMKLLEAWGGTERQHVSALNVTKECLHSVVCRVPLLEGAKVNLQSTSLALRQASDLTSSIKSILTSFSPPQIDKTAAMVSELAKVVALEKQLIEEFYDLFQATSVFEIQESSVKCNLVQLESWQQKYKQRQLLSEITT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1345 544 MobiDBLite consensus disorder prediction 1 51 - -
Lja3g1345 544 MobiDBLite consensus disorder prediction 18 39 - -
Lja3g1345 544 MobiDBLite consensus disorder prediction 143 236 - -
Lja3g1345 544 MobiDBLite consensus disorder prediction 183 210 - -
Lja3g1345 544 MobiDBLite consensus disorder prediction 143 167 - -
Lja3g1345 544 PANTHER AUGMIN FAMILY MEMBER 4 537 - -
Lja3g1345 544 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 4 537 - -
Lja3g1345 544 Pfam QWRF family 178 500 IPR007573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1345 Lja-Chr3 14066978 14069413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1345 - - lja:Lj3g3v2769460.1 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1345 3 14066978 14069413 Lja3g1345 3 14066978 14069413 ECH
Lja3g1345 3 14066978 14069413 Lja3g1345 3 14066978 14069413 PCT