Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1342 ATGAGGAAAAATGCTATTTTTCATTCAGGAAGGTTATATAGTGACAGGAAGTGGGTTCTCCCATTTTTTGCTAGCTTGCTGGTATCTGTTAGTCTGGTTTTGACAGCTATATTGGGGAGAGGTAGCTCTTCTGGCGGGTCGGAGCAGTCACCGTTTGACATCATTGCATTATCAAGATCTGAGGAGGATTCTAGTGAGTATTTTGTGGAATCAGATTTGGAAAGGTCGCTTAATGCTAATGTGGTTCAGAAGATGGAGGCACCTAGGTTGGCATATCTTATTTCAGGCACTAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTGTATCACCCAAGAAATCAGTATATCTTGCATTTAGATCTCGAGGCGCCGCCCCGGGAGAGGTTGGAATTGGCTAATACAGTGAAAGCTGATCCAATATTTCGAGAAATAGAGAATGTGCGTGTTATGTCACAGTCCAATTTGGTGACTTATAAGGGTCCTACGATGATTGCGTCCACACTTCAAGCAATAGCGATATTATTGAAAGAGAGCTCACAGTGGAACTGGTTTATTAATCTCAGTGCCTCAGATTATCCTCTTGTGACTCAGGATGATTTGCTTCATATTTTCTCTAATCTGTCAAGAGACCTCAATTTCATTGAACATACACGAATTGCTGGTTGGAAACTGAGCCATCGAGCGAGGCCGATTGTTGTTGATCCTGGCCTTTACTTGTCCAAAAAATCTGATATTGCATGGACTACTCAACGAAGGACACTTCCTACATCTTTTAAGTTGTTTACTGGTTCAGCTTGGGTTGTGCTGACCAGGTCCTATTTGGAGTACTGTATATGGGGATGGAATAACCTTCCACGGACTATCCTCATGTACTATACAAATTTTATCTCCTCCGCAGAGGGTTATTTTCACACTGTCATCTGTAACACCGAGGAGTTTCGCCGCACTGCAGTAAGCCATGATCTTCACTACATTGCTTGGGACACTCCCCCAAAACAGCATCCCATCTCATTGACTATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCTCCCTTTGCCCGGAAGTTTGCGAAGGATGATCTTGTCCTCGACAAGATTGACAAAGAACTCCTGGGCCGCACACATAGATTTTCACCTGGGGCATGGTGCATTGGCTCCTCAGATGGTGGGGCAGACCCGTGTTCATTGCGTGGCAACGATACAGTGTTTAGGCCAGGCCCTGGTGCTGAGAGGCTGAGTGAACTGCTTCAGACACTGTTGTCTAAAGATTTTCAAAGCAAGCAATGTTTGTGA 1305 0.4437 MRKNAIFHSGRLYSDRKWVLPFFASLLVSVSLVLTAILGRGSSSGGSEQSPFDIIALSRSEEDSSEYFVESDLERSLNANVVQKMEAPRLAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANTVKADPIFREIENVRVMSQSNLVTYKGPTMIASTLQAIAILLKESSQWNWFINLSASDYPLVTQDDLLHIFSNLSRDLNFIEHTRIAGWKLSHRARPIVVDPGLYLSKKSDIAWTTQRRTLPTSFKLFTGSAWVVLTRSYLEYCIWGWNNLPRTILMYYTNFISSAEGYFHTVICNTEEFRRTAVSHDLHYIAWDTPPKQHPISLTMKDFDKMVKSKAPFARKFAKDDLVLDKIDKELLGRTHRFSPGAWCIGSSDGGADPCSLRGNDTVFRPGPGAERLSELLQTLLSKDFQSKQCL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1342 434 Pfam Core-2/I-Branching enzyme 90 349 IPR003406 GO:0016020|GO:0016757
Lja3g1342 434 PANTHER GLYCOSYLTRANSFERASE 5 430 IPR044610 GO:0015020
Lja3g1342 434 PANTHER BNACNNG43180D PROTEIN 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1342 Lja-Chr3 14054119 14059413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1342 1 433 Glycosyltransferase AT4G03340 66.207 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1342 - - gmx:100795146 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1342 3 14054119 14059413 Lja3g1342 3 14054119 14059413 ECH