Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1333 ATGGAACCAGATACAAGTTATCACAGCAATGTCAATTGCAGTGGTGACTGTGATATCATTACCTGGTTTGAAGATGTGTCCATGAACGCCAGTTCCGTTCAGACTCAGATACTATGCAGTATTCTGAAGCAGAACTATGGGGTGGAATATCTGAAGAAATGGTTGGGGAACTACAATATCTCAGAGATGGATGCAAGTGCATTGGAATCCCTTTTCACTAGTGTGGTTCCCCTTGCCTCACTTGTGGATTTTGAGCCATATATCCAAAAAATTGCAGATGGAGAAACAGGTCCTATACTCACTCAACAACCCATGACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAAAAGTTTGTGCCCTTTACAAGCCATAGTGCACAAACTACCCTTCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCAAAACAAAAGGAGGCTTATCAGTAGGAACAGCCACAACACACTACTATGCAAGTCAAGAATTCAAAATCAAACAAGAAAAAACAAAGTCATTCACTTGCAGTCCTTATGAGATCATTTCAGCAGGGGACTATAAACAATCCACATACTGCCACCTCCTTCTTGGCCTCTTCTTCTCTGATCAAGTGGAGTTTATTTCTTCAGCTTTCGTCTACGGCATTGTGCAAGCCTTTCGCAGTTTCGAAGAGCATTGGAGGGAATTGTGCAGTGACATTAGACATGGTACTCTAAGTCCACGAATCAAACTACCACAAATGAGAGATTCTGTTTTGGGAATCATCACTTTATCAAATCCCTCATTGGCTTCAAAACTAGAAGCCTCTTGCCAGGAGCTAGAACTGGTAAATTGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACATATATTCCATAATGACAGGTTCTATGCAACCATACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGAGTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTTACTTTGAGTTCATACCACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGACCAATCCCACTATCCAAGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGACTATACAGGTGCAGATTAGGAGATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAAAATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAATAAACATAGACAAGAACACAGAGAAGGACCTTCAGATGGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAAGCAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGGAGAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGAGAAAAACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTGGCGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATGCACCATTAAAACATTCCGGAGTACAGCTTATGGTTCAAACCGACCATGA 1815 0.4303 MEPDTSYHSNVNCSGDCDIITWFEDVSMNASSVQTQILCSILKQNYGVEYLKKWLGNYNISEMDASALESLFTSVVPLASLVDFEPYIQKIADGETGPILTQQPMTTLSLSSGTTEGRQKFVPFTSHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLSVGTATTHYYASQEFKIKQEKTKSFTCSPYEIISAGDYKQSTYCHLLLGLFFSDQVEFISSAFVYGIVQAFRSFEEHWRELCSDIRHGTLSPRIKLPQMRDSVLGIITLSNPSLASKLEASCQELELVNWFGLVPKLWPNAKYIYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPGLAPESVTFAVVPTFSYFEFIPLYRQKQDHSSASVGDDFMEDRPIPLSKVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQMVVEKGSHVLNQESQAEVVDFTSYADVSNPPGCYVIFWEMKGETEEKVLEACCREMDAAFVDHGYVVSRKTCSIGPLELRIVESGTFKKILDCYVASGAGLGQFKTPRCTNNPVLLNILNACTIKTFRSTAYGSNRP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1333 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 14 599 IPR004993 -
Lja3g1333 604 Pfam GH3 auxin-responsive promoter 22 579 IPR004993 -
Lja3g1333 604 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 14 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1333 Lja-Chr3 13950406 13955221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1333 18 597 EF-hand Containing Proteins AT1G23160 35.185 5.22e-119 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1333 K14487 - gmx:100814683 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1333 3 13950406 13955221 Lja3g1333 3 13950406 13955221 ECH
Lja3g1333 3 13950406 13955221 Lja3g1333 3 13950406 13955221 PCT