Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1303 ATGGGGGTAAGAAATGGGATGTTGTATCATATTCTGGGGTTGTTATCGGTTTTGGCTTTCGTTTACATGTCATTTGGAGGGTTGAGGTTCAGGTTTGAGGAAGGGTCAGAAGTGGCTTTTGTGCAGAGAAACGGGACGCAGTTTGTGGTGGATGGGAAGGCTTTCTACGTAAACGGGTGGAATTCTTATTGGTTGATGTTCCAGTCGGTGGATGTTGATTCCAGACACAGGGTTCGTGAAATGCTGAAAACTGGTGCTAAGATGGGTCTCACTGTTTGTCGAACTTGGGGGTTCAATGATGGTGGTTATCATGCCCTTCAAACTTCCCCTGGTCGCTTTGATGAACAAGCTTTCAAGGCCTTGGATTATGTCATAGCAGAAGCAGGGCAACAAGGAATTAGGCTACTCCTTAGCTTAGTAAATAACTTGGAAGGATTAGGTGGGAAGCCTCAGTATGTCAAATGGGCATGGCAAGATGGGGTAGGGTTAAGCTCGTCTGATGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTATCTTGACAAGGAAAAATACTATCACTGGAATTGAATATAGAAACGACCCCACCGTTTTTGGTTGGGAATTGATTAATGAACCTCGGTGCATGTCTGATCCTTCTGGTGACACTCTACAAGAGTGGATAGAAGAAATGTCAGCTTTTGTCAAATTGATTGACAAGAACCATCTGGTGACTGTTGGGCTTGAAGGTTTCTATGGTCCTCATGACCCGAAAAGTTCGACTGTCAACCCTGGATATTGGGCATCCCAAGTTGGGTCTGATTTTATTCGGAATTCCAAAATCTCAAATATTGATTTCACCTCTGTTCATATCTATGGTGACCAATGGTCTTACAAGCAAGAATTTGAAGATCAACTGAAATTTGTCTCCAAGTGGATGCTTTCCCACATTGAAGATGGTGATGAAGTATTGCATAAACCTGTCTTGTTCTCTGAATATGGATTGTCACAAAGAATCCAGAACTTTTCCGCGTCTGACCGAGAGAAGATACACAAAACTATTCTAGACATAATTTACAAATCTGCCAAAAGAAACAAATCTGGAGCAGGTACTCTGATTTGGCAATTCTTGGTTGATGGAATCAATGAGTTTTCTGATGAATATGGGATTGTGCCAGGGGGGAATTCATCAACTTATTCACTGTTAGTTGAACAGTCATGCAGATTGGCCAAAGTTAAGGGATGGCCACAACAGGATGTAAAATTCAAACAAGTTTGTTAA 1284 0.4159 MGVRNGMLYHILGLLSVLAFVYMSFGGLRFRFEEGSEVAFVQRNGTQFVVDGKAFYVNGWNSYWLMFQSVDVDSRHRVREMLKTGAKMGLTVCRTWGFNDGGYHALQTSPGRFDEQAFKALDYVIAEAGQQGIRLLLSLVNNLEGLGGKPQYVKWAWQDGVGLSSSDDSFFFDPSIRSYFKNYIKTILTRKNTITGIEYRNDPTVFGWELINEPRCMSDPSGDTLQEWIEEMSAFVKLIDKNHLVTVGLEGFYGPHDPKSSTVNPGYWASQVGSDFIRNSKISNIDFTSVHIYGDQWSYKQEFEDQLKFVSKWMLSHIEDGDEVLHKPVLFSEYGLSQRIQNFSASDREKIHKTILDIIYKSAKRNKSGAGTLIWQFLVDGINEFSDEYGIVPGGNSSTYSLLVEQSCRLAKVKGWPQQDVKFKQVC* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1303 427 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 427 - -
Lja3g1303 427 SUPERFAMILY (Trans)glycosidases 40 403 IPR017853 -
Lja3g1303 427 Gene3D Glycosidases 36 414 - -
Lja3g1303 427 Pfam Cellulase (glycosyl hydrolase family 5) 77 376 IPR001547 GO:0004553|GO:0071704
Lja3g1303 427 PANTHER - 4 427 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1303 Lja-Chr3 13643915 13648525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1303 5 427 Glycoside Hydrolase AT2G20680 66.194 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1303 K19355 - gmx:100805627 692.575