Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1265 ATGCATCAAGCAATTCCTTACAGGTCATGGCGTCCTCACCACCACAACCCTACCACCAGCTTCACCCCACACCCATTAATTACACAATATTCCCACATCACCACCAACAATAATACAAGTAACGATGAGGATAAGAACAAGAACAAGAAGAGTGATCATTCATTTGTTTCATCCAATAATTCCAGTTCAATGGTGCGCAAAATGGTTTCTGAGAATGCGGTCATAGTGTTTGGCAGGAGAGGATGCTGCATGAGCCATGTGGTGAAGCGTTTGCTTTTGGGTCTCGGTGTCAACCCTGCAACTCATGAGGTTGAAGAGAAAGATGAAGTGGATTTTACTAGAGAATTAGAAGCCATTATTGATGATGGGAAATTATTACAGTTCCCTGTTGTGTTTATTGGAGGCAAGTTGTTTGGAGGATTGGAGCGTCTCATGGCTACTCATATTTCTGGTGAATTGGTTCCCTTACTCAAACAAGCTGGAGCTTTATGGCTATGA 498 0.4277 MHQAIPYRSWRPHHHNPTTSFTPHPLITQYSHITTNNNTSNDEDKNKNKKSDHSFVSSNNSSSMVRKMVSENAVIVFGRRGCCMSHVVKRLLLGLGVNPATHEVEEKDEVDFTRELEAIIDDGKLLQFPVVFIGGKLFGGLERLMATHISGELVPLLKQAGALWL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1265 165 SUPERFAMILY Thioredoxin-like 64 164 IPR036249 -
Lja3g1265 165 Pfam Glutaredoxin 74 137 IPR002109 -
Lja3g1265 165 Gene3D Glutaredoxin 57 164 - -
Lja3g1265 165 ProSiteProfiles Glutaredoxin domain profile. 62 164 - -
Lja3g1265 165 TIGRFAM GlrX-like_plant: glutaredoxin-like family 65 165 IPR011905 -
Lja3g1265 165 PANTHER GLUTAREDOXIN 38 165 IPR011905 -
Lja3g1265 165 CDD GRX_GRXh_1_2_like 73 156 - -
Lja3g1265 165 PANTHER GLUTAREDOXIN-C9 38 165 - -
Lja3g1265 165 MobiDBLite consensus disorder prediction 13 41 - -
Lja3g1265 165 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1265 Lja-Chr3 13296725 13297711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1265 65 165 Miscellaneous Gene Families AT4G15690 48.039 1.77e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1265 - - gmx:100818445 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1265 3 13296725 13297711 Lja3g1265 3 13296725 13297711 ECH
Lja3g1265 3 13296725 13297711 Lja3g1265 3 13296725 13297711 PCT