Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1216 ATGGACAACTTTGAACATGTCACAGAGCCTGTAAGTCCTACTGGTCGATATTTCAACACCCCATTGATATGTTCTTATGTTTTTGGGTTTTTAGAAGCAGAAATCCCAATTGATGACTCTCAAGCTTTGTGTTTGTTCAAAGATGTTTTTCTACCTATCAATCCTCGCTTCTCCTCCATCATGGAGAGAGACAAAGATGGCACAATGAAATGGAGAAAAGTAGAGGTGAGAGCTGAAGACCATATGAAGTTCCCCATATTTCCAGAAAGTGAGTCATTGGAAGTGTATGACAAGTATTTTGATGAGTATGTGTCAAAGATACTAATGGAAAGGACCCCTCAAGATAAGTCACTTTGGGAAATTCATGTGATCAAATATCCAACAAGCAATGCTGCTGGGACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCTCTTGTTGGTGCTCTTCTTTCTTGTCTTCAGAGAGCTGATGATCCTTCTCTGCCTCTGTCTTTCCCTTCTCGCAAACCATCACAATCACTTGCTCCGAAGAAAGGCTCCTTCAAGTGGTTCCCTTCAACCATACTCTCCGTTTTCAACTCCTTCTCGGATTTTGGATGGAGCATAGTTAAAAGTTCAGTGATAGAAGATGACAAAACACCCATAAGGAGTGGTGATGAAGGTCTTGAGTTTCAGCCATGTGTCCTGTCAAACATATCTTTCTCCCTGGATGAAATAAAAATGATCAAGTCCAAGCTTGGAGTGACAATAAACGATGTGATCACTGGGGTAATTTTCTATGGGATTCGTCTATACATGCAAGAGATTGACAATAAGGCAAGAACAGCAAATTCCACAGGATTGGTGCTGCTTAATACTAGGAACATTGGAAGTTATCAATCAGTCCAAGATATGATGAAGCCTGATTCCAAATCACCTTGGGGGAATCATATTTCTTTCTTACATGTCCCAATACCCAAGTTAAGCCAAGCCAGCTCATCCAACCCCCTTGAATTTGTTTGGAAAGCACAAAAGTTTATCAAGAGGAAGAGAAATTCTTTCACAGTTTTTCTTATTGAGTGGGTGTTGGACATGGAGCTGAAATTAAGAGGACATGAGGTGGGTCTATACACTATACTATGA 1134 0.4039 MDNFEHVTEPVSPTGRYFNTPLICSYVFGFLEAEIPIDDSQALCLFKDVFLPINPRFSSIMERDKDGTMKWRKVEVRAEDHMKFPIFPESESLEVYDKYFDEYVSKILMERTPQDKSLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKPSQSLAPKKGSFKWFPSTILSVFNSFSDFGWSIVKSSVIEDDKTPIRSGDEGLEFQPCVLSNISFSLDEIKMIKSKLGVTINDVITGVIFYGIRLYMQEIDNKARTANSTGLVLLNTRNIGSYQSVQDMMKPDSKSPWGNHISFLHVPIPKLSQASSSNPLEFVWKAQKFIKRKRNSFTVFLIEWVLDMELKLRGHEVGLYTIL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1216 377 Pfam WS/DGAT C-terminal domain 311 372 IPR009721 GO:0004144
Lja3g1216 377 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 2 370 IPR045034 GO:0008374|GO:0045017
Lja3g1216 377 PANTHER O-ACYLTRANSFERASE WSD1-LIKE PROTEIN 2 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1216 Lja-Chr3 12799549 12803740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1216 9 368 Acyl Lipid Metabolism Gene Families AT5G53390 29.551 1.10e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1216 - - lja:Lj6g3v1316290.1 751.895