Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1214 ATGGAGCTCACTATTGTTCAACCTGATGATTGGCATCTTCACCTCCGTGATAGGGCCCTCCTTGAAGCTGTCATCCCTCACAGTGCAAAGCATTTTGGAAGGGCTATAGTAATGCCGAATTTGAAACCACCCATCACCACCACAGCTGCTGCTATTGCTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAAATAGCAACTTCACTCCTCTGATGACACTTTACCTAACAGATATGACAACTCCTGATGAGATTAAACTTGCAAAAAAAAGTGGAGTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCAACAACAAACTCCCAAGATGGTGTTACAGATATTTTTGGAAAATGTTACTCTGTTCTTCATGAAATGGTTGAGCAAGATTTGCCATTATTGGTTCATGGAGAGGTTACAAATCCAGAAGTTGATGTTTTTGACCGGGAAAAGGTCTTCATTGAAACTATCTTAGAGCCTTTAGTTCAAAGGCTTCCACGGCTGAAGGTTGTGATGGAGCATATTACCACCATGGATGCTGTTAAATTTGTAGAATCTTGCAAAGAAGGTTATGTTGCAGCAACTGTGACACCACAGCATCTTTTTCTCAATCGTAATGCTTTGTTCCAAGGTGGCTTACAACCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCACAGACAGGCCATTGTTTCAGCTGTCACTGGTGGAAGTACACGGTTTTTCCTCGGAACTGATAGTGCTCCACATGATAGGCGTAACAAGGAATGTTCGTGTGGATGTGCTGGCATATACAACTCCCTGGTTGCTCTATCCATATATGCGAAGGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTGGAGGCTTTTACAAGTTTTAATGGACCTGACTTCTACGGCCTCCCCAGAAACAAGCTAAAGATTAAACTGAGGAAAGCTCCTTGGAGAGTACCTGAGTATTTGTCATTTCCATTCGGAGATATTGTTCCCATGTGTGCTGGTCAAACACTTGAATGGGAGGCGTTGCTTAATTAA 1041 0.4246 MELTIVQPDDWHLHLRDRALLEAVIPHSAKHFGRAIVMPNLKPPITTTAAAIAYRESILKAIPKNSNFTPLMTLYLTDMTTPDEIKLAKKSGVVYGVKLYPAGATTNSQDGVTDIFGKCYSVLHEMVEQDLPLLVHGEVTNPEVDVFDREKVFIETILEPLVQRLPRLKVVMEHITTMDAVKFVESCKEGYVAATVTPQHLFLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTGGSTRFFLGTDSAPHDRRNKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKLKIKLRKAPWRVPEYLSFPFGDIVPMCAGQTLEWEALLN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1214 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Lja3g1214 346 Gene3D - 2 344 - -
Lja3g1214 346 Pfam Amidohydrolase family 10 307 IPR006680 GO:0016787
Lja3g1214 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
Lja3g1214 346 PANTHER DIHYDROOROTASE 1 342 IPR004721 GO:0004151|GO:0019856
Lja3g1214 346 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Lja3g1214 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Lja3g1214 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Lja3g1214 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1214 Lja-Chr3 12783968 12788817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1214 K01465 - gmx:100804389 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1214 3 12783968 12788817 Lja3g1214 3 12783968 12788817 ECH