Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1210 ATGTATCAAGAATTCATCTCCACTATTCCGGCGGCCACTGGCTGGAGCTCCGACGAAGTCAGTTTTGCCGACACGGTTTTTGGGTTTTGGGAGGATGCTCATGTCCTTGTCCCACCGGGAAATTCATCAGATTCCAGCAACGATGAATTAGATTACAATGATGAGGAAGAAGATGGAAGTTTTTGCAACCTGGAAAAGAATAAAGCTTTCTGGGAAGAACAAGAACAACTTCTTAAGGCAACTTTGTGTAGGACTAGCTCGCGTGAGATGAAAATCCGGCAAGCTGTGAAGGAGGCTTTAGGGGAATTGAACATGTCGGAGTTGCTCTGCTTTTGCCGGAGACCGGTGGCGACTAGGAGCTGCCGGGATTGTTTGCGGAGGGAGATGTGTGATCGATTATTGAACCTTGGCTACAATTGTGTCATTTGCAAATCTAAATGGAGGAGTTCATCGGAAATCCCATCAGGGGAGCACACTTACTTGGAAGTGACAGAAAATTCATCAAACGCCAAAAGAGGGGTAGTAAAAGTGGTAATTGAACTGAACTTCCGAGCCGAATTCGAGATGGCGCGTGCCAACGAAGAGTACTTCCAATTAGCTACGAAATTGCCTGAAGTATTTGTTGGCAAATCAGAGAGGCTAAGAGCAGTGGTTAAGATCATGTGCTCAGCTGCTAAAAAATGCATGAAGGAGAAGAAAATGCACTTAGCACCATGGAGGAAGCAAAAGTACATGCAAGCAAAGTGGCTTGGAACATGCTTAGATAGGTCCATAGTGGAACCGTTGCCTATGGTGGACACAACTAGAGGAGCTAGACCTAAGGCTTCAATGCTCACTTGTGATTTATTAGACAACATTTCTGGATTGCACTGTAGGAATGCAGTGGAGGTTGTTTGA 897 0.4537 MYQEFISTIPAATGWSSDEVSFADTVFGFWEDAHVLVPPGNSSDSSNDELDYNDEEEDGSFCNLEKNKAFWEEQEQLLKATLCRTSSREMKIRQAVKEALGELNMSELLCFCRRPVATRSCRDCLRREMCDRLLNLGYNCVICKSKWRSSSEIPSGEHTYLEVTENSSNAKRGVVKVVIELNFRAEFEMARANEEYFQLATKLPEVFVGKSERLRAVVKIMCSAAKKCMKEKKMHLAPWRKQKYMQAKWLGTCLDRSIVEPLPMVDTTRGARPKASMLTCDLLDNISGLHCRNAVEVV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1210 298 PANTHER DUF506 FAMILY PROTEIN 14 298 - -
Lja3g1210 298 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 127 253 IPR006502 -
Lja3g1210 298 Pfam PDDEXK-like family of unknown function 24 253 IPR006502 -
Lja3g1210 298 PANTHER OS03G0796600 PROTEIN 14 298 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1210 Lja-Chr3 12755901 12757549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1210 - - lja:Lj0g3v0081509.1 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1210 3 12755901 12757549 Lja3g1210 3 12755901 12757549 ECH