Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1201 ATGACAGCTTCAACTTCCTCTCTTCTCACCTTCACACTCACCACAACCCCAAACATCGCTGCAAATCGCCACCATTCCACATTCACCAATCTCCGATTCAACCCCATAGCCAAACCTTCCCCTCTACGCTTCTTCCTTCCCCTAACTCCTCAAAACCCGCACCACCACCGCCGCCGCAGCGCCGTCGTCACAAACATGTTCACCGGCCTAGTTGAAGAATTGGGCACCGTCAAGCAGCTGGGCATGGCCTCTCACGGCGGCTTTGACTTGAACGTTGAGGCCAAGACTGTCCTGGAGGGTGTCATCCTCGGCGACAGTATTGCTGTCAATGGTACTTGCCTCACGGTGACGGAGTTTGACCTGGAGGGTTCGAACTTTACGGTTGGGTTGTCGCCGGAGACGCTGAGGAAGACTTCTCTTGAGGAATTGGAACCTGGGTCGGTGGTGAATCTGGAGCGGGCTTTGTTGCCCACGACCCGGATGGGTGGGCATTTTGTGCAGGGTCACGTGGATGGCACGGGGGTGATTGTGTCCATGGATGCTGAAGGGGATTCTTTGTGGGTGAAGGTGAAGGCTGAGAAGGAGGTGCTCAAGTATATTGTGCCAAAAGGGTTTATTGCTGTGGATGGGACTAGTTTGACTGTGGTTGATGTGTTTGATGATGAAGGGTGCTTCAATTTCATGTTGGTGGCTTATACTCAGCAGAAGGTGGTCATTCCTTTGAAGAAGGTTGGGCGGAAGGTGAATCTTGAGGTGGATATCCTTGGAAAGTATGTGGAGAGGCTTCTCAGTAGTGGTTTTGTTCAGTCCATTGCAAATACAAATTCTTGA 831 0.5187 MTASTSSLLTFTLTTTPNIAANRHHSTFTNLRFNPIAKPSPLRFFLPLTPQNPHHHRRRSAVVTNMFTGLVEELGTVKQLGMASHGGFDLNVEAKTVLEGVILGDSIAVNGTCLTVTEFDLEGSNFTVGLSPETLRKTSLEELEPGSVVNLERALLPTTRMGGHFVQGHVDGTGVIVSMDAEGDSLWVKVKAEKEVLKYIVPKGFIAVDGTSLTVVDVFDDEGCFNFMLVAYTQQKVVIPLKKVGRKVNLEVDILGKYVERLLSSGFVQSIANTNS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1201 276 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 165 263 IPR026017 -
Lja3g1201 276 Gene3D - 169 271 IPR023366 -
Lja3g1201 276 PANTHER RIBOFLAVIN SYNTHASE ALPHA CHAIN 59 274 IPR001783 -
Lja3g1201 276 CDD Riboflavin_synthase_like 66 255 IPR001783 -
Lja3g1201 276 SUPERFAMILY Riboflavin synthase domain-like 160 264 IPR017938 -
Lja3g1201 276 SUPERFAMILY Riboflavin synthase domain-like 65 156 IPR017938 -
Lja3g1201 276 PANTHER RIBOFLAVIN SYNTHASE 59 274 - -
Lja3g1201 276 Pfam Lumazine binding domain 68 154 IPR026017 -
Lja3g1201 276 Pfam Lumazine binding domain 167 253 IPR026017 -
Lja3g1201 276 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 66 164 IPR026017 -
Lja3g1201 276 TIGRFAM ribE: riboflavin synthase, alpha subunit 66 266 IPR001783 -
Lja3g1201 276 Gene3D - 66 155 IPR023366 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1201 K00793 - gmx:100809163 369.007