Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1176 ATGAGATTAAGGAAGCGGAAACGATGTTTTCCTTCTTGTTCCTCTCGTCTCAAAGTTGATGAGGATGAGATTTATTGGAGACACAGAAAGGAAGATAATGAGTTGGAATGGTCACATAATTCCACTCACTTAATAACTCAGTTGACTCGATGTTTGGCTAATGCTATGGTTGGACCACGATCATGGATAGGAGGATTCTTTCACCGCACAAGCACTAAACGAAGTGAAAAAATTGTTGACTATCCTTTGAGTTCTATTGAGGAGGAAAGACTTCACAGGCTTCAAGAACGGCTGCAAGTGCCTTACGATGAAACTTGCCTCGACCATCAAGAATCACTGAGAGCTTTATGGCATTGTGCCTTTCCTAATGTTTCTCTGGAAAGCCTGATATCTGACCAATGGAAAGACATGGGATGGCAAGGTCCTAATCCGTCAACCGACTTTAGAGGATGTGGCTACATTTCCCTTGAAAATCTGCTTTATTTCGCACGGAAATATCCGGCATCTTTTCACAGGCTGTTGTTGAAGAAAGATGGAGATCGAGCTACATGGGAATATCCATTCGCTGTTGCTGGCATTAACATATCGTTTATGTTGATACAGATGTTGGATTTATACTCAGAAAAGCCTCGATGTCTTCCAGGCATGAATTTTGTCAAGTTATTAGGAGAAAACGAAGAAGCATTCGATATTCTGTACTGTATAGCTTATGAGATGATGGATGCACAATGGCTGGCTATGCATGCTTCCTACATGGATTTTAATGAGGTTCTACAAACAACACGGATGCAATTGGAGAGAGAGCTATCCTTAGAAGACATCAACAAAATACAAGACCTGCCTGCATACAATCTGTTGTACAATTAG 867 0.4106 MRLRKRKRCFPSCSSRLKVDEDEIYWRHRKEDNELEWSHNSTHLITQLTRCLANAMVGPRSWIGGFFHRTSTKRSEKIVDYPLSSIEEERLHRLQERLQVPYDETCLDHQESLRALWHCAFPNVSLESLISDQWKDMGWQGPNPSTDFRGCGYISLENLLYFARKYPASFHRLLLKKDGDRATWEYPFAVAGINISFMLIQMLDLYSEKPRCLPGMNFVKLLGENEEAFDILYCIAYEMMDAQWLAMHASYMDFNEVLQTTRMQLERELSLEDINKIQDLPAYNLLYN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1176 288 PANTHER BNAC05G01970D PROTEIN 51 287 - -
Lja3g1176 288 Pfam ELMO/CED-12 family 92 258 IPR006816 -
Lja3g1176 288 ProSiteProfiles ELMO domain profile. 108 269 IPR006816 -
Lja3g1176 288 PANTHER ENGULFMENT AND CELL MOTILITY 51 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1176 Lja-Chr3 12222822 12228141 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1176 K23538 - gmx:100811853 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1176 3 12222822 12228141 Lja3g1176 3 12222822 12228141 ECH