Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1129 ATGGAAATGGGTTTGGTCTCTGTAGATCGCTGGGTACAGGGAAGCCAGGCCTACTTCCTCACCCACCTCCACTCCGATCACACCAAAGGCCTCTCCTCCTCCTGGTCCCACGGCCTCCTCTTCTGCTCCCCGACCACCGCCAAACTCCTCCCCTTCAAGTTCCCCGACTTCGACCTCTCCCTCCTCCGCATCCTCCACGTCGGCACCACCCACACCCTCTCCCTCCGCTCCCCTTCCTCCTCCTCCACCACCACCGTCTTCGTCACCGCCATCGACGCCTGCCACTGCCCCGGTTCCGTTATGCTGCTGTTTCGCGGCGAGTTTGGTTGCGTGCTTCACACTGGTGATTTTCGCTGGGAGGTTGGTTGCGAGAGAGCCAGGATGGCTAAACAGGTGCTTCGTGCTGCTCTTGGTGGTGAAGATGGGGTTGATGTTCTTTACCTTGATAATACCTACGCTAATCCTACCTATGATTTTCCCTCTCGCCAAGTCGCGGCGCGGAAGGTGATTGATTTAGTTAAGTCCCTTCCTGATCATGATGTCATTATTGGGATTAACAGTTTGGGGAAAGAAGATCTCTTGGTTCAGATTGCAATGGAGCTTAACATTAAGGTTTGTGTGTGGCCGGAGCGCTTGCGGACTATGCGTATTCTTGGTCTCCCAGATGTATTCACAACCGACACGACTATTACTAGAGTTAGAGTTGTTCCTCAATGTAGCTTAAAGATTAACACTTTAGAGACACTGAATCAAAGGCGCCCTACTATAGGAATTTTGCCATCTGGTCTTCCATGGGCAAGGAAATACATTCAGAGGGGTGAGTTTCTCACTGGTTCCTTTTTGACATCACGTTATAAGAGAGACAAATGGAGTGAAAATAGTAAGGACCAGAGTGACAAGCCAATTGGAAACACAGGACCTCTTGAACAGATTCATCAGCATATGTATGCAGTTCCCTACTCTGAACACTCTAATTATTTCGAGATTGAGGATTTTATCAAGCTTGCCAAACCAACCAGCATCAAGGGCATTGTTTCTGCATCCGAATGCTACATTGAGCCCATGTACTTTTTTGGTCGGCTTTGTCGTGTTAACCAACCAAAACAAGAGTTGCATAACAGGTCTGAAGTGAAAGACAGTGGTAAAAGGGTAGGAACAGTAAGCCCTGAAACTTCACTCGGAGGTCATGTTAAGTTGCTTAGATACGGAAGCAGGACCTCGAGGTTTAAGCTTTTAGGCGTTCATAAGAGGAGGTTGAATGTATTGATAAGAAAGCGCCGTGGTGTGAAGATTGTGGACATTGACAGTCCTGAAATTGTTGGAAATTAA 1329 0.4838 MEMGLVSVDRWVQGSQAYFLTHLHSDHTKGLSSSWSHGLLFCSPTTAKLLPFKFPDFDLSLLRILHVGTTHTLSLRSPSSSSTTTVFVTAIDACHCPGSVMLLFRGEFGCVLHTGDFRWEVGCERARMAKQVLRAALGGEDGVDVLYLDNTYANPTYDFPSRQVAARKVIDLVKSLPDHDVIIGINSLGKEDLLVQIAMELNIKVCVWPERLRTMRILGLPDVFTTDTTITRVRVVPQCSLKINTLETLNQRRPTIGILPSGLPWARKYIQRGEFLTGSFLTSRYKRDKWSENSKDQSDKPIGNTGPLEQIHQHMYAVPYSEHSNYFEIEDFIKLAKPTSIKGIVSASECYIEPMYFFGRLCRVNQPKQELHNRSEVKDSGKRVGTVSPETSLGGHVKLLRYGSRTSRFKLLGVHKRRLNVLIRKRRGVKIVDIDSPEIVGN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1129 442 Pfam DNA repair metallo-beta-lactamase 222 342 IPR011084 -
Lja3g1129 442 Gene3D - 6 345 IPR036866 -
Lja3g1129 442 Gene3D - 158 323 - -
Lja3g1129 442 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 371 - -
Lja3g1129 442 PANTHER PROTEIN ARTEMIS 5 371 - -
Lja3g1129 442 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 338 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1129 Lja-Chr3 11741049 11744994 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1129 K15341 - gmx:100775842 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1129 3 11741049 11744994 Lja3g1129 3 11741049 11744994 ECH