Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1111 ATGACTTCTACCCTCTCTCATGCACCTTTTGAGTTAGATATGCGGGGCAATTTGTTTGGTATGCTGGCTGCACATCCATTATCTCCCTTGCTGTCCCTTCATCACTTGGACGCATTGGATCCTCTCTTTCCTGACATGAACAGAACAGAAGCTTTGAAACATCTTATTGCAGCTGCAAATGTTGACCCTGCCAGGATCCTTCAGCAAACTGTCTGCTATGATCGATCAAATTCTTTGACTTTCTCAGTTTCTTGGGGCTTTGCTGTACAGGTCTTCCAAGGAAATGAACTTCTACCTGATCTGCTTACCGTGCAGAAAACTTTTACGTCATGGAGGAGGGGTAGCAAAGTTTATGCCAATTTTATGTTTAACACAAGGGACTATCCTAGAGATCCTTGTAAAAGGCCTTCTGTATTTTTCTTGAAAAATGTTTCATCTGATAAAAGGCGCATATGGAGCAATTACAGTAGGCGTGTAGTGAGAAACTGCATTGAATCAGATGTGACAAAGCTGAAGGAGATCATCGTTTTTTCAAGAAAGCTGGATCTTAGCATTGAACAGATGAAAGCCCCCCGTCGTCAGTGCTGCAATGTTATGCCATCTTCTAACAAATCAATCAGTATCCATATTAGAGAGTGTGAAAATGACGAACTGATCTCCATGGCTTTGTTGTATTTTTTTACTACTAAAGTGAAATGTTTTTTAAATTTATTACTGTGTCATTTATTTCACAAACACACCACACTGCAGTCTCTGGTTAACTTTCTTCTAGTCTCTTCTTCATTTTGTGTCCTTTATGTCCTCATATCAGTGCTGTTCCTAGGGACATCAAAACTAGTACATGTCCATTCTTCATCACAAGAATTGTCCACACCCACCACTCTTGATCACCTTGTGTTTGGAATTGCTTCAAGCAAGAGCTCATGGGCAAAGAGGAAGGACTATGTGAAGCTTTGGTGGAGAAACAACAATGCAATGAAGGGGTGTGTGTTCCTTGATACCCTCCCTGATGAAGATGAAGACAATGATGCTTCTGATTCTGTTCCTCCTCTCTGTGTCTCTGAAGACACTTCGCGGTTTCGCTACACTTGCCGAGGCGGGCTTCCCTCAGCGATTCGCGTGGCGCGTGTTGTGGTGGAGACTATAGCCCTGAAGAACAATTCAGATGTGAGGTGGTATGTGTTTGGAGATGATGACACTGTTTTCTTTCCAGAGAATTTGGTGAAGACTCTTTCCAAATATGATCATGGCCTTTGGTACTATGTTGGGGCAAACTCTGAGGTTTATGAGCAGAACCGGTTGTTTGGGTTTGGAATGGCTTTTGGGGGTGCTGGTTTTGCTATCAGTTCCTCTCTGGCAAATGTCTTGGTCAAGGTTTTTGATTCGTGTTTGGAAAGGTACCCTCATCTCTATGGAAGTGATGGCAGGGTGTACTCTTGCTTAGCAGAGCTTGGTGTGGGATTAACACATGAACCTGGTTTTCATCAGGTTGATTTGAGGGGAGATACCTTTGGCCTATTAGCTGCTCATCCAGTAACTCCCTTGTTATCCCTGCATCACCCTGATTACACTGATCCAATCTTTCCAAACATGACAACCACACAAGCCCTGAAGCATTTATTCAAAGCTGAAAGTGTTGATCCTCAGAGGATGCTACAACAAACAATTTGCTATAACAGGTGGTTTTCATGGACAATTTCAGTGTCATGGGGATATGCAGTTCAGGTTTTCCCTCACCACATGTCTTTGCGTGAGGTTCTGAAGGTGCAAGAAACGTTCAAGCAGTGGAAGAAAGGAAACATGTTGGCAAAAGCATACACTTTCAACACAAGAGGAACTCCCCCTGACCCATGTAAGAGACCCTCAGTTTTCTATCTAGACAATGTGTCTTTTGGTAATGATGGCATCATCATCAGTAGTTACAAGAGATCGTTTCAAAATTGCTCAAATGATGATCTGTTATCTCCTAAGAGACTAGAAGAGGTCAAAGTGGTCACCAAGAAGCTAGACCTTGATATCAAACAGTTGAAGGCTCCAAGAAGGCACTGCTGTGATGTAATGCCCTCTAGCGCTCGTGACCAACTGGAAATCGAAATCAGAGAATGCAAAGATGAAGAATTGATTTACATGCACTGA 2136 0.4274 MTSTLSHAPFELDMRGNLFGMLAAHPLSPLLSLHHLDALDPLFPDMNRTEALKHLIAAANVDPARILQQTVCYDRSNSLTFSVSWGFAVQVFQGNELLPDLLTVQKTFTSWRRGSKVYANFMFNTRDYPRDPCKRPSVFFLKNVSSDKRRIWSNYSRRVVRNCIESDVTKLKEIIVFSRKLDLSIEQMKAPRRQCCNVMPSSNKSISIHIRECENDELISMALLYFFTTKVKCFLNLLLCHLFHKHTTLQSLVNFLLVSSSFCVLYVLISVLFLGTSKLVHVHSSSQELSTPTTLDHLVFGIASSKSSWAKRKDYVKLWWRNNNAMKGCVFLDTLPDEDEDNDASDSVPPLCVSEDTSRFRYTCRGGLPSAIRVARVVVETIALKNNSDVRWYVFGDDDTVFFPENLVKTLSKYDHGLWYYVGANSEVYEQNRLFGFGMAFGGAGFAISSSLANVLVKVFDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLRGDTFGLLAAHPVTPLLSLHHPDYTDPIFPNMTTTQALKHLFKAESVDPQRMLQQTICYNRWFSWTISVSWGYAVQVFPHHMSLREVLKVQETFKQWKKGNMLAKAYTFNTRGTPPDPCKRPSVFYLDNVSFGNDGIIISSYKRSFQNCSNDDLLSPKRLEEVKVVTKKLDLDIKQLKAPRRHCCDVMPSSARDQLEIEIRECKDEELIYMH* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1111 711 Pfam Protein of unknown function, DUF604 431 684 IPR006740 -
Lja3g1111 711 Pfam Protein of unknown function, DUF604 11 196 IPR006740 -
Lja3g1111 711 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 220 - -
Lja3g1111 711 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 248 709 - -
Lja3g1111 711 Gene3D - 285 564 - -
Lja3g1111 711 PANTHER FRINGE-RELATED 248 709 - -
Lja3g1111 711 PANTHER FRINGE-RELATED 10 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1111 Lja-Chr3 11562525 11570622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1111 252 676 Glycosyltransferase AT1G05280 53.132 2.14e-169 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1111 - - gmx:100784602 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1111 3 11562525 11570622 Lja3g1111 3 11562525 11570622 ECH