Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1107 ATGTTGAAACACAGTGATCGAGTTAATATCAATGAATTGCTGAATGACAATGAATTGATAAATCATTGTATTCAAATACTGAGTAAGGAGTTTCCAACTGCAATAGAGACCCTTGTAGATGAACGAGATCAGTACATGTCCTCCAGATTATTAAAATTTGCAAGTCAGAGGAGATCAGTTGTTGCTGTTGTTGGAAAGGGGCATCTAGAAGGAATAAGGAAGTACTGGAAGCAACCAGTGGCGGAGGATCTCCTGACAGTTCCATCTTCCAAACCAGGCCCTGCAACTAGATTATTGAAAATGTACATGTCCTCCAAGTTATTAAAATGTGCAAGTAAGAGTAGATCAGGTGTTGCTGTTGTTGGAAGGGCACATCTAGAAGGAATAAAGAAGTGCTGGAAGCAACCAGTAGTGAACATTTAA 423 0.3948 MLKHSDRVNINELLNDNELINHCIQILSKEFPTAIETLVDERDQYMSSRLLKFASQRRSVVAVVGKGHLEGIRKYWKQPVAEDLLTVPSSKPGPATRLLKMYMSSKLLKCASKSRSGVAVVGRAHLEGIKKCWKQPVVNI* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1107 140 CDD TraB_PrgY-like 24 76 IPR046345 -
Lja3g1107 140 PANTHER PHEROMONE SHUTDOWN PROTEIN 101 138 IPR046345 -
Lja3g1107 140 PANTHER PHEROMONE SHUTDOWN PROTEIN 14 94 IPR046345 -
Lja3g1107 140 Pfam TraB/PrgY/gumN family 12 79 IPR002816 -
Lja3g1107 140 PANTHER TRAB FAMILY PROTEIN 101 138 - -
Lja3g1107 140 PANTHER TRAB FAMILY PROTEIN 14 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1107 Lja-Chr3 11532329 11535592 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1107 - - lja:Lj3g3v2888650.1 136.346