Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1098 ATGGATCATTCTATCTACTCATGTAAAGGAAAAGCATCTGCCAGCAAAAACCAAAGTTGTGAGGAAAGTGGATGGACAGCTTATTTTGAAGATTTCTCAAAAGGAGGAGGCATAGAGCCTAGCTACTGTTCCAGTTTGGGTGGCTCCTCTTTGATCTCAGATGCTGCTTCTTACGCTGCATGGAAATTTTCTCATCATCATCACAATCAATTATCAGATAATAAGGGTGCCCAAATTAATCCCCTTAAGAAGCTTTGTTTCAAGAAAGCAAGAACCAAACAGATATCAGAGGATGACCCTTTGGAGGACACTGCTAGCTCTCCAGTCAACAGCCCCAAGGTGAGAGACTTGAGTCCAACTGAATTCATTTCCAGGAAGATTGATGATCAACTAGAGGGTTCTATGGGTAACAGATTCACATCATCAGAGAATTATTCAGATTTGCAAATAGAAGATAAGCATATTGATGAAGCATTTAATAGGAACAATATGGATTGCACAGACTTGAAGAAAAGAGGGCTCTGCCTGGTTCCTTTGTCCTTGATTAATTATTTGGGATGA 561 0.4011 MDHSIYSCKGKASASKNQSCEESGWTAYFEDFSKGGGIEPSYCSSLGGSSLISDAASYAAWKFSHHHHNQLSDNKGAQINPLKKLCFKKARTKQISEDDPLEDTASSPVNSPKVRDLSPTEFISRKIDDQLEGSMGNRFTSSENYSDLQIEDKHIDEAFNRNNMDCTDLKKRGLCLVPLSLINYLG* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1098 186 MobiDBLite consensus disorder prediction 97 116 - -
Lja3g1098 186 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 185 IPR039280 GO:0010089
Lja3g1098 186 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1098 Lja-Chr3 11424068 11425340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1098 - - gmx:100786184 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1098 3 11424068 11425340 Lja3g1098 3 11424068 11425340 ECH
Lja3g3483 3 68565524 68566598 Lja3g1098 3 11424068 11425340 PCT