Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1090 ATGCCTCAGTTATGCCGGGAAGTTGGTAACTCCACCACGCTCCGGCGGCGGTTTCACCACCGTGTCTCGTTGCTCCGGCGATGTATCCTCCGTGTCCTCCACCATTTTCTTGTCTGCTCTGGGAGGAAGCCTACCAATGCTGCCTATAGGATGCTGCATCCGCATGTGGCATTGCCTTCTCCGTCGCCGCCGCCGGATTTTTCTGCTGTTGAGGCTGGCCTTGGAGGGGTGCTGGTTGCGCCTCCGCCTGTGTTTCATACTCATGATTTTGAATCTGATTTGGTTTCCCTCAAAATCAGCTTGTTGGGTGACTGCCAAATCGGAAAAACCAGCTTTTTGGTGAAGTATGTTGGGGATGAAAAAGAGCAGGGAGAATTGCAGAGGAAAGGGCTAAATCAGATGGACAAAACTTTGGTTGTGGAAGGGGCACGTATATCCTATTGTATCTGGGAAGTACAAGGGGATGGAAAAACAGATGACCAAATGCCAATTGCTTGCAAGGACTCTGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTTCTGGGATGGTACAAAGAAGCAAGGAAATGGAATCAGACTGCAATTCCAGTGTTGATAGGAACCAAATTTGATGATTTCATTCAGCTCCCAATTGATCTGCAATGGACCATCGCCAGTGAGGCAAGAACATATGCAAAGGCCCTCAATGCCACTCTATTCTTTTCCAGTGCAACTTACAACATCAATGTGAACAAGATCTTCAAGTTCATCACTGCGAAGCTCTTTGACCTGCCATGGACAGTGGAAAGGAATCTAACTGTTGGGGAGCCCATCATTGATTTCTGA 846 0.4728 MPQLCREVGNSTTLRRRFHHRVSLLRRCILRVLHHFLVCSGRKPTNAAYRMLHPHVALPSPSPPPDFSAVEAGLGGVLVAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1090 281 Pfam Ras family 98 261 IPR001806 GO:0003924|GO:0005525
Lja3g1090 281 ProSiteProfiles small GTPase Rab1 family profile. 91 281 - -
Lja3g1090 281 CDD Spg1 97 278 IPR017231 -
Lja3g1090 281 SMART rho_sub_3 99 263 IPR001806 GO:0003924|GO:0005525
Lja3g1090 281 SMART rab_sub_5 97 264 - -
Lja3g1090 281 Gene3D - 89 271 IPR027417 -
Lja3g1090 281 PRINTS Transforming protein P21 ras signature 138 160 - -
Lja3g1090 281 PRINTS Transforming protein P21 ras signature 239 261 - -
Lja3g1090 281 PRINTS Transforming protein P21 ras signature 97 118 - -
Lja3g1090 281 PRINTS Transforming protein P21 ras signature 199 212 - -
Lja3g1090 281 PANTHER - 75 280 - -
Lja3g1090 281 PANTHER MONOMERIC G-PROTEIN 75 280 - -
Lja3g1090 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 272 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1090 K07976 - gmx:100780638 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1090 3 11327640 11331365 Lja3g1090 3 11327640 11331365 ECH