Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1083 ATGTATATAACTACGGCCTCTTCACTTCTCAGAACAACCAGGCCCAGACTCTTCTTCTCTTCTAGAATCTTCGCTCATCCTCCTCCTCGCGCTTCCTTCTCCCCCGCGCCTTCCCGATCCTTCATCTCCTCGCTCCCCCGCTGGAGCCACCGCCTCCACTGCGGTTCTCCCTCCACTCTTCGCCCTCAGATCAGAGCCGTCGCTCCTGTTCTCGAACGCTTCCACCGCAAGATCGCTACCATGGCTAGTGAAAATCCTTTCAAGGGAAACTTGACTAGCCTTCCGAAGCCGGGTGGCGGCGAGTTTGGAAAATTCTACAGTCTTCCGTCGCTCAACGATCCAAGAGTTGAAAAGTTACCATACTCCATAAGGATTCTCCTTGAGTCTGCCATTCGTAATTGTGACAATTTCCAAGTCACTAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAAGACTTCTTCTAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGAGTTCTCTTGCAGGATTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGAGACGCTATGAATAAGCTTGGCAGTGATTCAAATAAGATCAATCCTCTGGTACCTGTTGATCTTGTTGTTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAAAATGCGGTGCAGGCTAATATGGAACTTGAGTTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGATCAACTGCATTTCATAACATGCTTGTTGTTCCTCCTGGTTCTGGAATAGTACATCAGGTCAATCTTGAATATCTTGGGCGGGTTGTTTTCAACAACGAGGGCTTACTCTATCCTGACAGTGTAGTTGGGACCGATTCACATACAACTATGATAGATGGGCTCGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGCCAGCCTATGAGCATGGTTTTACCCGGAGTTGTTGGGTTCAAGTTAGCTGGAAAACTGCGCAATGGTGTTACAGCAACTGATTTGGTTCTAACTGTGACACAAATTCTTAGAAAGCACGGCGTTGTCGGGAAATTTGTTGAGTTTCATGGTGATGGTGTGGGTAAATTATCTTTAGCTGACAGAGCCACTATTGCTAATATGGCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAGCTAACTGGAAGAAGTGATGAGACTGTGACCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGCCACAACAAGAACGAGTTTATTCATCATATCTTGAATTGAACCTTTCCGATGTTGAACCATGTATCTCAGGACCTAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGCTTGTCTTGATAACAAAGTTGGATTCAAGGGATTTGCTATACCAAAAGAAACACAAGGAAAAGTTGCGAAGTTTGATTTCCATGGACAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATAACAAGCTGTACGAATACATCTAACCCAAGTGTTATGCTTGGAGCTGGTCTTGTTGCGAAAAAGGCTCATGAGCTTGGTTTGAAGGTCAAACCTTGGGTTAAAACAAGTCTTGCTCCTGGTTCAGGAGTTGTTACGAAATATCTACTCCAGAGTGGGCTGCAAAGTTATCTCAATGAACAAGGTTTTAATATTGTTGGATTTGGCTGCACAACATGTATTGGCAATTCAGGCGATCTGGATGAATCTGTTGCTTCTGCTATCTCAGAAAATGACATTGTAGCTGCTGCTGTGTTGTCTGGAAACCGTAATTTTGAGGGCCGTGTCCATGCCCTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTTGTTGTCGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGATGGCAAGAATGTCTACTTGAGGGATATCTGGCCATCCACTGAAGAAATTGCAGAGGCTGTTCAATCTAGTGTGTTGCCTGCCATGTTCCGAAGCACATATGAGGCTATTACCAAGGGCAACCCCATGTGGAATCAATTACAAGTTCCTGCTGACACTCTCTACTCATGGGACTCCAACTCAACATATATTCATGAACCCCCATACTTCAAGAATATGACGTTGGATCCTCCTGGAGCTCATGGTGTGAAAGATGCCTTTTGCCTGCTGAACTTTGGTGACAGTATAACTACTGATCATATTTCTCCAGCTGGAAGCATTCAGAAGGATAGTCCTGCTGCTAAATACCTCCTAGAGCGTGGGGTAGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGATGAGGTGATGGCAAGAGGAACTTTTGCCAATATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGACAGTGCATGTTCCATCTGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGAAATACAGGGCTTCTGGCCAACCCACCATTGTGCTCGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCGGCCAAGGGTCCAATGTTATTGGGAGTCAAAGCTGTCATAGCTAAAAGTTTCGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCCCTTTGTTTCAAATCCGGGGAGGATGCGGACACATTGGGATTGACTGGTCATGAACGTTATACGATTGACCTTCCTAGTGAGATCAGGCCTGGCCAAGATGTGACGGTCACAACTGATAATGGAAAATCTTTCACCTGCAAATTACGCTTTGATACTGAGGTGGAACTTGCTTACTTCAACCATGGAGGCATACTTCCATATGTCATACGGAGCCTAGCTCAGCAGTGA 2928 0.4566 MYITTASSLLRTTRPRLFFSSRIFAHPPPRASFSPAPSRSFISSLPRWSHRLHCGSPSTLRPQIRAVAPVLERFHRKIATMASENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRVEKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSSKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLAGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFHGDGVGKLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVTMIESYLRANKLFVDYNEPQQERVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHACLDNKVGFKGFAIPKETQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLKVKPWVKTSLAPGSGVVTKYLLQSGLQSYLNEQGFNIVGFGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIWPSTEEIAEAVQSSVLPAMFRSTYEAITKGNPMWNQLQVPADTLYSWDSNSTYIHEPPYFKNMTLDPPGAHGVKDAFCLLNFGDSITTDHISPAGSIQKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPSGEKLYVFDAAMKYRASGQPTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSEIRPGQDVTVTTDNGKSFTCKLRFDTEVELAYFNHGGILPYVIRSLAQQ* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1083 975 TIGRFAM aconitase_1: aconitate hydratase 1 103 971 IPR006249 -
Lja3g1083 975 Gene3D - 677 738 - -
Lja3g1083 975 Gene3D Aconitase, domain 3 453 676 IPR015931 -
Lja3g1083 975 PRINTS Aconitase family signature 280 293 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 452 466 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 579 592 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 370 383 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 227 240 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 356 369 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 294 309 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 517 528 IPR001030 -
Lja3g1083 975 PRINTS Aconitase family signature 251 259 IPR001030 -
Lja3g1083 975 Gene3D Aconitase, domain 3 84 452 IPR015931 -
Lja3g1083 975 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 52 975 IPR006249 -
Lja3g1083 975 Pfam Aconitase C-terminal domain 777 904 IPR000573 -
Lja3g1083 975 CDD AcnA_IRP_Swivel 754 924 IPR044137 -
Lja3g1083 975 SUPERFAMILY LeuD/IlvD-like 717 971 - -
Lja3g1083 975 ProSitePatterns Aconitase family signature 1. 513 529 IPR018136 -
Lja3g1083 975 SUPERFAMILY Aconitase iron-sulfur domain 99 713 IPR036008 -
Lja3g1083 975 PANTHER ACONITATE HYDRATASE 52 975 - -
Lja3g1083 975 ProSitePatterns Aconitase family signature 2. 579 592 IPR018136 -
Lja3g1083 975 Pfam Aconitase family (aconitate hydratase) 145 648 IPR001030 -
Lja3g1083 975 CDD AcnA_IRP 166 650 - -
Lja3g1083 975 Gene3D Aconitase, domain 4 741 974 IPR015928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1083 Lja-Chr3 11243140 11251377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1083 K01681 - gmx:100793264 1782.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1083 3 11243140 11251377 Lja3g1083 3 11243140 11251377 ECH