Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1068 ATGATCAACTCCACAAGGTTCCAATTTTTCTTATTGTTGGTTGTGTTGCTATTGGCATGTGTAAGTGGAGAGGACCCTTACAGGTTCTACACTTGGAATGTCACGTATGGAGACATTTATCCACTTGGAGTTAAACAACAGGGGATATTGATAAATGGGCAATTCCCAGGGCCACAGATCGAGTCTGTGACTAATGATAATTTGATTGTCAATGTTTTCAACAGCTTGGATGAACCTTTCCTCATCTCTTGGAATGGAGTGCTACAGAGGAGAAACTCATGGCAGGATGGAGTTTATGGTACCAATTGTCCAATCCCACCAGGGCAGAACTTCACTTATGTTCTTCAAGTGAAGGATCAGATTGGCAGCTACTTCTATTTCCCTTCCCTTGCATTCCACAAAGCAGCAGGAGGTTATGGTGGTTTCCAAATTGCTAGCCGCTCCGTGATTCCTGTGCCTTTTGATCCTCCGGCAGGAGATTTCACCATATTGGCTGGAGACTGGTATAAGAGAAATCACACTGATTTGAGGGCCATTTTAGATAGGGGAAGTGACCTTCCTTTCCCCGATGGGCTTATCATCAATGGTCATGGTTCCAATGCCTTTAAGTTCACAGTTGATCAAGGTAAGACTTACAGATTCAGGATATCAAATGTGGGACTCACCAGTTCCATCAATTTCAGAATCCAAGGGCATAAGATGATGCTTGTTGAGGTGGAAGGAACTCACACTCTCCAAAACACTTATGAATCACTTGACATTCATCTGGGGCAAAGTTACTCTGTATTAGTCACGGCTGATCAACCACCCCAAGACTACTCCATTGTTGCTACAACAAGGTTCACCTCTCAGGTGTTGAATGCTACATCCATTCTTCATTACAGTAACTCAGCCGGAAGTATGTCTGGCCTTTTCCCTGCAGGACCAACAACTGAAATTGATTGGTCCATAGAACAGGCTCGCTCTCTTAGGAGGAATCTGACAGCAAGTGGGCCAAGGCCTAATCCACAAGGATCTTACCATTATGGTATGATAAATACAACAAGGACAATTAGGCTTCAAAATTCTGCTCCAATGATCAATGGCAAACAGAGATATGCTGTCAACAGTGTGTCCTTTATCCCTGCTGATACACCACTTAAACTGGCTGATCACTTCAATATCCAAGGGGTGTTCTCCCTTGGAAGCATCTCAGACAACCCGACCGGTGGCGGCGGTAACCTCCAGACTTCTGTCATGGCTGCTGATTTCCGAGACTATGTGGAGGTTGTGTTTGAAAATCCTGAAGACACCGTGCAGTCATGGCACATTGATGGACATAGCTTCTTTGTTGTAGGAATGGATGGAGGACAATGGTCAGCTGCAAGCAGATTAAATTACAATTTAAGAGATACAATTTCTCGGAGCACAGTTCAGGTATATCCCAAGTCATGGACTGCATTGTACATGCCATTGGACAATGTGGGGATGTGGAATGTGAGGTCTGAGAATTGGGTTCGTCAGTACCTGGGCCAGCAATTTTATCTGAGAGTGTATTCTCCTGCAAAGTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTGTGCGGTGTGGTAAGGCAATAGGCCACTAA 1614 0.4455 MINSTRFQFFLLLVVLLLACVSGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIVNVFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGFQIASRSVIPVPFDPPAGDFTILAGDWYKRNHTDLRAILDRGSDLPFPDGLIINGHGSNAFKFTVDQGKTYRFRISNVGLTSSINFRIQGHKMMLVEVEGTHTLQNTYESLDIHLGQSYSVLVTADQPPQDYSIVATTRFTSQVLNATSILHYSNSAGSMSGLFPAGPTTEIDWSIEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPMINGKQRYAVNSVSFIPADTPLKLADHFNIQGVFSLGSISDNPTGGGGNLQTSVMAADFRDYVEVVFENPEDTVQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTISRSTVQVYPKSWTALYMPLDNVGMWNVRSENWVRQYLGQQFYLRVYSPAKSWRDEYPIPSNAVRCGKAIGH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1068 537 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Lja3g1068 537 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Lja3g1068 537 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Lja3g1068 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lja3g1068 537 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 533 - -
Lja3g1068 537 SUPERFAMILY Cupredoxins 344 533 IPR008972 -
Lja3g1068 537 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Lja3g1068 537 Pfam Multicopper oxidase 160 296 IPR001117 -
Lja3g1068 537 PANTHER MULTI-COPPER OXIDASE 8 533 IPR045087 -
Lja3g1068 537 SUPERFAMILY Cupredoxins 156 334 IPR008972 -
Lja3g1068 537 Gene3D - 343 535 IPR008972 -
Lja3g1068 537 Gene3D - 27 148 IPR008972 -
Lja3g1068 537 Gene3D - 158 333 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1068 Lja-Chr3 11106120 11115676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1068 - - gmx:100775285 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1068 3 11106120 11115676 Lja3g1068 3 11106120 11115676 ECH