Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1061 ATGGTTGAAATGAGCAACTCTGAGAAACAACCACAAACTCATATAGCATTACCAATAGTTATAGACATTCCAGTCACCAAAACTCAATCCCATAATCACAACAAGTCTCAAATCCATGTCCAATCTTCTTCAATTCTATCACAAATCCATGCAGGGTATTTCAGAATCAGCTTAGCCCTCTCAAGTCAAGCCTTGTTGTGGAAGGTCCTCATTGAACCAATCGAAGACGCACACGCTCTTAGAAAAATATTTTCATTCATACCCTCCACTGCTTTCACTTTCCTATGGTATCTAGCCTTGTTCACACTAGTCACACTCTCTTTTCTCTATGTTCTAAGATGTGTGTTTCACTTTGACATGGTGAAAGATGAGTTCTTAAGCCATGTGGGAGTGAACTACCTCTTTGCTCCATGGATTTCATGTCTACTTTTGCTAGAGTCATCACCATTTGTTCCCTCTAATTCACTTAGCCACAGAGTTCTTTGGTGTGTGTTTGTGACTCCTGTGGTGGTGCTTGATGTGAAGATCTATGGCCAGTGGTTCACAAAGGGGAAGAGGTTTCTGTCGGCGGTCGCGAACCCAACAAGCCAATTGTCTGTGATTGGAAACTTGGTAGGGGCTCGGGTGGCTGCGGAGATGGGTTGGAAAGAGAGTGCAATTTGCTTGTTTTCTCTTGGGATTTCGCATTACTTGGTGCTTTTTGTGACTCTGTATCAGAGGTTGCCAGGGAATGATAATAGCCTCCCTCCTCTGCTGCGTCCTGTGTTCTTCTTGTTCTTTGCGGCGCCAAGCGTAGCCAGCTTGGCTTGGCGCTCCATTAGTGACGAGTTCGATACCGCTTCGAAGATGCTGTTCTTTCTCTCCTTCTTCCTTTTCATGTCTCTGGTTTCAAGGCCTCTGCTATTTAAGAAGTCCATGAAGAAATTCAATGTGGCATGGTGGGCTTATTCTTTTCCTCTGACGGCTTTGGCGCTTGCTTCAGCAGAATATGCACATCAAGTTAAGGGACTCACTGCTCATGCTGTTATGTTGGTCTTATCATTGATCTCAGTTTTGGTGTCTGTGGTTTTAATGATTGTCACTGCTCTCAACACTAGCATACCCTTACCAGCTAACAACCTTGACTCAGATCAGAAAAGCAATTGCACAGCAACGTGA 1158 0.4421 MVEMSNSEKQPQTHIALPIVIDIPVTKTQSHNHNKSQIHVQSSSILSQIHAGYFRISLALSSQALLWKVLIEPIEDAHALRKIFSFIPSTAFTFLWYLALFTLVTLSFLYVLRCVFHFDMVKDEFLSHVGVNYLFAPWISCLLLLESSPFVPSNSLSHRVLWCVFVTPVVVLDVKIYGQWFTKGKRFLSAVANPTSQLSVIGNLVGARVAAEMGWKESAICLFSLGISHYLVLFVTLYQRLPGNDNSLPPLLRPVFFLFFAAPSVASLAWRSISDEFDTASKMLFFLSFFLFMSLVSRPLLFKKSMKKFNVAWWAYSFPLTALALASAEYAHQVKGLTAHAVMLVLSLISVLVSVVLMIVTALNTSIPLPANNLDSDQKSNCTAT* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1061 385 Pfam Voltage-dependent anion channel 49 361 IPR004695 GO:0016021|GO:0055085
Lja3g1061 385 CDD TDT_SLAC1_like 50 361 - -
Lja3g1061 385 Gene3D - 42 367 IPR038665 -
Lja3g1061 385 PANTHER OS11G0274300 PROTEIN 6 373 - -
Lja3g1061 385 PANTHER - 6 373 IPR030183 GO:0006873|GO:0008308|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1061 Lja-Chr3 11011178 11013481 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1061 - - gmx:100794114 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1061 3 11011178 11013481 Lja3g1061 3 11011178 11013481 ECH