Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1058 ATGATTTCTCAGCTTGGTCGTGGATTTAAGGCTCTTATTCCAGATCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCCGAAGCGCAGCATTTGTTTGATGGTCTTGATTGGCAAGGTGCGGTGAAGGATGTCCGCGCTTCAGTTGACTGGCTTAAAACAAATGGTTCGAGGAAGGCTGGTGTAACTGGCTTTTGTATGGGGGGTGCTCTCGCTATTGCCAGCTCTGTCTTGGTTCCAGATGTTGATGCTGCTGTAGCTTTCTATGGTTTTCCTTCGTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCTCACTTTGGAGAGCTGGATGATTTTGTTGGCTTTTCGGATGTTACGGCTGCGAAGGCCTTGGAGGAGAAATTGAAGGCATCTGGAGTTCCACACGAGGTACACATATATCCCGGCAACAGACATGCATTTATGAACAGATCTCCAGAAGGAATCAATAGGAGGAAGAGCATGGGAATGCCTGATGAAGATGAAGCTGCAGTTCAGCTCGCCTGGTCTCGCTTCCAGTCATGGATGACACATTACTTGTCTAGTTAG 576 0.4861 MISQLGRGFKALIPDLYRGKVGLDVAEAQHLFDGLDWQGAVKDVRASVDWLKTNGSRKAGVTGFCMGGALAIASSVLVPDVDAAVAFYGFPSSELADPAQAKAPVQAHFGELDDFVGFSDVTAAKALEEKLKASGVPHEVHIYPGNRHAFMNRSPEGINRRKSMGMPDEDEAAVQLAWSRFQSWMTHYLSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1058 191 Pfam Dienelactone hydrolase family 4 188 IPR002925 GO:0016787
Lja3g1058 191 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 2 189 - -
Lja3g1058 191 PANTHER BNAC04G12290D PROTEIN 2 189 - -
Lja3g1058 191 Gene3D alpha/beta hydrolase 4 189 IPR029058 -
Lja3g1058 191 SUPERFAMILY alpha/beta-Hydrolases 6 189 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1058 Lja-Chr3 10968596 10971853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1058 K01061 - gmx:100799250 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1058 3 10968596 10971853 Lja3g1058 3 10968596 10971853 ECH
Lja3g3513 3 69788264 69792124 Lja3g1058 3 10968596 10971853 PCT