Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1054 ATGAACCAGACAGGGGTTGCGGTTTTGAGGGTGGGTTTGGTGGTGGTGGCTCTCTGCATAGCTAGCTACATACTCGCTCCTCCTCTCTATTGGCATTTCAGAGAAGGTTTGGCTGCAGTCAAACACTCTTCTTCTTCATGTGCCCCTTGCCTCTGTGATTGTTCCTCACAACAACCCATCCTTTCGATTCCTCAAGGGCTGAGCAACACTTCATTTGGAGATTGTGCAAAGCCTGATCCAGAAGTGACTGGAGACACTGAAAAGAATTTTGCAGAGCTGTTGTCTGAAGAGCTAAAGCTACGTGAAAATGTAGCTTTGGAAAATCAACGACGTGCTGACATGGCTCTGCTCGAGGCAAAGAAGATTGCATCTCAGTATCAGAAAGAAGCAGACAAGTGCAATTCAGGGATGGAGACATGTGAGGGGGCTAGGGAGAAAGCTGAGTTGGCATTGGTCGCACAGAAGAAGCTATCTGCATTGTGGGAACTTAGAGCGCGCCAGAAAGGATGGAAAGAAGGGGTTACCAAATCTCAGTCTCAAGGGAAAGTACAGAGTTCTTAG 561 0.4777 MNQTGVAVLRVGLVVVALCIASYILAPPLYWHFREGLAAVKHSSSSCAPCLCDCSSQQPILSIPQGLSNTSFGDCAKPDPEVTGDTEKNFAELLSEELKLRENVALENQRRADMALLEAKKIASQYQKEADKCNSGMETCEGAREKAELALVAQKKLSALWELRARQKGWKEGVTKSQSQGKVQSS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1054 186 Pfam Protein of unknown function (DUF1068) 7 173 IPR010471 -
Lja3g1054 186 PANTHER - 7 177 - -
Lja3g1054 186 PANTHER EXPRESSED PROTEIN 7 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1054 Lja-Chr3 10925231 10927928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1054 - - gmx:100527412 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1054 3 10925231 10927928 Lja3g1054 3 10925231 10927928 ECH