Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1053 ATGGCGGAAACCCTAAGCCCTAACCCCGCTCTGGGCCAGAAGCAGAGACTCCCGGTTGCCGCTCGTATCCAATCCCCCACCAGCCCCTTCTTCTTAGGCTCCAACGACGACCAGCTCGAACGCGCCCAGGCTCGCGCTGCACGCGCCGCCGCCATCCGCCGCAAGGGACTCGCCGTCTCTCAATCCTTCAACTCCGACGCCGATCCCTGCCTCAACAAGCAGCAGATCCTCGATTTGTTCCAGAATTGCATCAAGCTCGCCAGCGAGAACAAAATTAATCAGAAGAACACGTGGGAGTTGAACTTGATTGACCACCTTACTGATATTATCAAGGCTGAAGATGAACCTGATGCGGAGACTAATTTCCAGAAGGCAAGTTGCACACTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTAGATTCTGTGCATTCCGAGGCGTATAAAGTCCTTGGTGGGATGAATAGAGCAGGCCAAGATGCTGAGGAAGACACTACTGCGGAGGGTGATAACATTGAAAGTGGACAAGAAGGAAACAGGAAAGAGACAGATAAAAAGTTGTCGCCTTTGTCAACACTGGAACCATCTTTTGAGGCTCTTAATGTAAAGAAGTTTGACGCTGCATTTGTTGTGGATCCCCTCTATCGCCAGACTACAGCAAAATTTGATGAAGGTGGAGCTAAGGGTCTTTTAATGAACAATCTCGGTGTATATGGTGGATGTAGGGTACTCTTTGATTCACAAGAAGTTCCTGCAAAGTGTATGGAAGGCCAAAATCGACAGGATATTTCAGATACTATTGATCTTTCTTTTCTCAGAGATTGTATTGAGCAGATGCTATTGGATATTCATGTGAAGGATGAAATCTCTCCAACTCTCAGCATTATAGTTAACCAATTTGATGAAAAAAATAGAAGGCCAACTGATTTTCAACTTCATGGCCAAAATTCAGCTGAAGAGTTTGACGCTGATGTTAATTGTGAAAATGGGGCTGACAGAGAAGAATATGAGAACTGCACGACCTGGAATGATGATCATGATGACCACGTAGATATGGCTGATCTAGGCTCTAATGATGCAGATCCAAGTTTTCCTAACTATCCTCAGGAAAATGAGCAATTTCCTTCCCCAGACTCTGATACGGATGAAAGATTGGAAAATGTTGATGGTTATCTATTCTTGAATCTGGGTTTTAGTTCAAAACAAAATGCATGGGCAGGTCCTGATCATTGGAAGTATCGAAAATCCAAAGTCTCTGAGGTTCAACCTACTTCTGAAGATGGGCCAACCCTGAAAACTAAGCAGCCAAGGAGTAAGAAACAAGCCGAAGTTGATTTAGATTTCACGGGTTCTCTGGAGAAGAACTTATTAGATATATTTGCTCCGCCCAAGAATCCCAAATCGTTACTTCTCCCTGAAAGCAGAGTGCCTTGCAATACTAAACTTCCAGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGTTATTTCTCCTGCCGAATGTGAAGTGTCTTGGAAGGAGGACAAAAAGGTTCTCAGATGGATCTAGAGAACAAAGCAATGAGTATGAATCATTCCCTTCCTGGGATAATGGAAGTGTTGGTGGTGGGGAGTCTGTTGACTATGAAGGTGATCATCATAGTGACATGGAGGACCCTGGCACTCTTATTAGTCAGCCTCGTCTGGTCAACAAAATTGAAGTCCAGTATGACAAAACGTCCAAACAAGTTGATGTTCAGGCACTAAAAGTTACACTTTGGGACCATGTTCAAGAATCTGTTAAACTTACTTCTGAGGGTCAAAAAGAAATGATATCTTTCCGGAATATGCTGGCCAACTTTCCTAGCGAATGCAATGCAGCTTCAAACATTAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTGTTGCATTTGGCAAATGAGAATGGGCTTAGCATTCAAAGCACCCCCAACTTGGATGATCTTGCAATATACCTTCCACAAGTTGGTGATACTATAAGTGAACCAGTTTAG 2016 0.44 MAETLSPNPALGQKQRLPVAARIQSPTSPFFLGSNDDQLERAQARAARAAAIRRKGLAVSQSFNSDADPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEDEPDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQDAEEDTTAEGDNIESGQEGNRKETDKKLSPLSTLEPSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMEGQNRQDISDTIDLSFLRDCIEQMLLDIHVKDEISPTLSIIVNQFDEKNRRPTDFQLHGQNSAEEFDADVNCENGADREEYENCTTWNDDHDDHVDMADLGSNDADPSFPNYPQENEQFPSPDSDTDERLENVDGYLFLNLGFSSKQNAWAGPDHWKYRKSKVSEVQPTSEDGPTLKTKQPRSKKQAEVDLDFTGSLEKNLLDIFAPPKNPKSLLLPESRVPCNTKLPEDCHYQPEDLVKLFLLPNVKCLGRRTKRFSDGSREQSNEYESFPSWDNGSVGGGESVDYEGDHHSDMEDPGTLISQPRLVNKIEVQYDKTSKQVDVQALKVTLWDHVQESVKLTSEGQKEMISFRNMLANFPSECNAASNISDISPHLCFICLLHLANENGLSIQSTPNLDDLAIYLPQVGDTISEPV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1053 671 MobiDBLite consensus disorder prediction 341 384 - -
Lja3g1053 671 MobiDBLite consensus disorder prediction 416 443 - -
Lja3g1053 671 PIRSF Condensin_H 530 662 IPR022816 GO:0000796|GO:0007076
Lja3g1053 671 PIRSF Condensin_H 7 273 IPR022816 GO:0000796|GO:0007076
Lja3g1053 671 PIRSF Condensin_H 262 552 IPR022816 GO:0000796|GO:0007076
Lja3g1053 671 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 - -
Lja3g1053 671 MobiDBLite consensus disorder prediction 513 556 - -
Lja3g1053 671 MobiDBLite consensus disorder prediction 174 188 - -
Lja3g1053 671 Pfam Condensin complex subunit 2 549 658 IPR022816 GO:0000796|GO:0007076
Lja3g1053 671 Pfam Condensin complex subunit 2 28 514 IPR022816 GO:0000796|GO:0007076
Lja3g1053 671 MobiDBLite consensus disorder prediction 341 355 - -
Lja3g1053 671 MobiDBLite consensus disorder prediction 157 188 - -
Lja3g1053 671 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 665 IPR022816 GO:0000796|GO:0007076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1053 K06676 - gmx:100799781 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1053 3 10919430 10923775 Lja3g1053 3 10919430 10923775 ECH