Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1045 ATGATGACTCTGGCTCGAGGCTTCGCCATTGTCTTCCTCTTGTTCGCTCTATACTGTGGTCTGGACCCTTTTCAGCACAGTCCCATTGCCAGCTTCCCTGATTTTGAGGCCAAGAAGGTTGTCATGCCGCCATGGTCTGAGGTTCCAACAAACCAGGACAAGGAGAATTTGTTGCAGAATTCGGAGGTTAAGTTTCTGAACCAAGTGCAGGGACCTGAGAGCATTGCCTTCGACCCTCTTGGTCGTGGCCCTTATACTGGTCTGGCTGATGGAAGAATTGTGTTCTGGAATGGACAGTCTTGGGTTGACTTTGCTTACACCTCCCCTAACAGGTCAGAACTATGTAATCCTTTAGCATCTGCGACACCATTTAGTTATATGAGGACTGAGCATATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACAGGTGATCTGTACATTGCAGATGCATATTTTGGGCTGCTGAAGGTAGGGCCTGAGGGTGGTTTAGCAACATCTCTTGTAACTGAGGTTGAAGGGGTGCCACTGAGGTTTACTAACGATGTTGACGTCGATACAGAAGGGAATGTTTATTTTACAGAGAGCAGTGCTATTTATCAGAGAAGGAACTTCGTTCAGCTGGTACTTTCAGGGGACGACACTGGCAAGGTTGTGAAATATGATCCTACCACTAAGGAAACCACTGTTCTTCTGAGGAACATTCAATTCCCAAATGGCATTTCCTTAAGCAAGGATGGTTCCTTCTTTGTCTTCTGTGAAGGGCTTGTTGGCAGGCTACGTAAATACTGGCTGAAAGGAGAGAAGGCTGGAACTTCAGAGATCTTAGCCGTCATACCTGGAGCTCCTGACAATGTGAGAGTCAATGAAAATGGTGATTTTTGGGTGGCTGTTCATTGTAGAAGGAGCTCGTACGCATACCTCGGCGGTCTCTATCCAAAGATAAGGAAAGCCATACTCAAGCTTCCTATATCAACAAAGTATCAATACCTGCTTCAAATAGGAGGGTGGCAACATGCGGCGATTGTCAAGTATAGCCCTGAAGGTAAAGTCTTGCAGATATTGGAGGATAGTCAGGGGAAAGTGGTTAGAGCTGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTTTGGATAGGAAGTGTTCTCATGCCTTTTATTGCTGTTTATAACTTGGAATGA 1185 0.4582 MMTLARGFAIVFLLFALYCGLDPFQHSPIASFPDFEAKKVVMPPWSEVPTNQDKENLLQNSEVKFLNQVQGPESIAFDPLGRGPYTGLADGRIVFWNGQSWVDFAYTSPNRSELCNPLASATPFSYMRTEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATSLVTEVEGVPLRFTNDVDVDTEGNVYFTESSAIYQRRNFVQLVLSGDDTGKVVKYDPTTKETTVLLRNIQFPNGISLSKDGSFFVFCEGLVGRLRKYWLKGEKAGTSEILAVIPGAPDNVRVNENGDFWVAVHCRRSSYAYLGGLYPKIRKAILKLPISTKYQYLLQIGGWQHAAIVKYSPEGKVLQILEDSQGKVVRAVSEVEEKDGKLWIGSVLMPFIAVYNLE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1045 394 Gene3D - 55 394 IPR011042 -
Lja3g1045 394 Pfam Strictosidine synthase 183 270 IPR018119 GO:0009058|GO:0016844
Lja3g1045 394 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 393 - -
Lja3g1045 394 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 393 - -
Lja3g1045 394 SUPERFAMILY Calcium-dependent phosphotriesterase 49 393 - -
Lja3g1045 394 Pfam Strictosidine synthase-like, N-terminal 65 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1045 Lja-Chr3 10831830 10835799 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1045 - - lja:Lj3g3v2926320.2 689.493