Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1036 ATGTCAGCTGTTATGACCAACAAGATTCAACAATCCCAAGGCTTGCTATCATGTTCTCTGAAGATAGAGGACGAGACTGTGCTGACTCAGAAGCATGGTATAGTCACCATTCTGGGCTGTGACACTGAGAAAAACAAAGCTTCTTCTCTGAGAAGAACTCTATCAGCAGACATGTCCTCAAAGAAATGGCTTCCTCAAAATGGCTCCTCCCCTAAGCAAAAGATTGCTTCCTCTGAACAACTCTCTGACCCCAAAACCATTGCTGACTCATTCTCCTCTTCCTCAGAAGAGGACTATGAGGAAAACAAGGATCTTGAAGCTGAAGCTGAAGCTGAGAGGGAAAGGCTTGAGATTTGGAGCTCAATCCAAAGAAACAAGAAGGAAGAGCAAGACAAAGCAGTAGCAGGATCAATTGATACTTGGAGCTCAATCATATCAATGAAGTCCAATGATGAAATCTCCAAATCACTTCCTCCTTACATTCACCCTCTTGTGAAAAGGTCAAAAAGCTGCTCTTTGAGTGTGAAGAGCCTTGAAATTTGCACTGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGGTTTTCTCACCCTCCTCTTACACTTCATCAGAAACAAGGGAAACAGAGGAAGCAGAGCAACAAGAAACAAAACAAGAAGCAGAACAAGAAAAACAAGAAGAGAAAGTAGAAGAACCAGAAGAAGAAGAAGTAGAAGAAATTCCAAGGTACAATAACTATGCTGTTACAGCTACTACAAAGAAGTCCCTACCACGTTCTTTCCCTCCACCACTCCCTCCACTCTCTAACCAAACAGGGCCTTCCCTTCTTCACATGAGGCCCTACCGTGACAATGGAAGGTTGGTCCTTGAAGCTGTGACGCTTCCTTCACTCAACAATTTCTCTGTTCAGCGCCAAGATGGTCGCCTTGTCCTCACTTTTGCCAATCCCCAAGAAGAGCCTATGGAGGAGGATGAAGCTGAGTACATGGAAGAAGAAGAGAATGAGTATGATTATGTGGAGGATTTGAAGGAAGAGTTTGGAGGGTTTGAGATGGAAGAAGATGATGACGGTGATGATGTTGATCAAGGAGAAGAAAAACAGGATGAGGATGAAGAATTTGATGTTGATGATAGTGATGGGGAAGAAACAGAAGAGGTTGGGGAATCTGAGAATGTTGTTAAGGATGTAGTGATGGAGAAAGGGCTGAAATTTTCAAGTGGGGCAACTAGTGTTAAGAGGGTAGCATTGATGGTGAATAAGCCAATTGGGCTAGTGAATAGGAATCCTAGTTGGTCAGAGAAGTTCAATGAAGAGGGAAATTTTGAGAATGTGAATGAGGTGGAGGATGCTAGTCCATGTCAAATTGCACAATCACTCCCACCAAGGCCAAGGGTGGCTAGGTTGATTCCTTCTAAAACAGCTATGAATTCAGCAACAGCATCTGCTGCAGCTTCTCTCAATTTCAATGCTTATGAACAATACTGGAGGACCACCACCAAGTCATCAACAAATGGTGTTACTAACCCACTTGCTCAAGAGGATAACAAAAACTCAGCCTTGAAAAACTACAACAGCAACAAGCTCATTGTCTCAAATGAGAATCAGCAAGTTCTGGTTCTGAGAGGGAAAAATGGTGATTACTTGGTTCATAATTTGAAGAGCTGCAAGGATTCTAGAAGGTCCTTTCTGTTCTGGGAGCCTTATTGCATTGCCACCTCTTGA 1722 0.4338 MSAVMTNKIQQSQGLLSCSLKIEDETVLTQKHGIVTILGCDTEKNKASSLRRTLSADMSSKKWLPQNGSSPKQKIASSEQLSDPKTIADSFSSSSEEDYEENKDLEAEAEAERERLEIWSSIQRNKKEEQDKAVAGSIDTWSSIISMKSNDEISKSLPPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSDGVFSPSSYTSSETRETEEAEQQETKQEAEQEKQEEKVEEPEEEEVEEIPRYNNYAVTATTKKSLPRSFPPPLPPLSNQTGPSLLHMRPYRDNGRLVLEAVTLPSLNNFSVQRQDGRLVLTFANPQEEPMEEDEAEYMEEEENEYDYVEDLKEEFGGFEMEEDDDGDDVDQGEEKQDEDEEFDVDDSDGEETEEVGESENVVKDVVMEKGLKFSSGATSVKRVALMVNKPIGLVNRNPSWSEKFNEEGNFENVNEVEDASPCQIAQSLPPRPRVARLIPSKTAMNSATASAAASLNFNAYEQYWRTTTKSSTNGVTNPLAQEDNKNSALKNYNSNKLIVSNENQQVLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1036 573 MobiDBLite consensus disorder prediction 350 386 - -
Lja3g1036 573 MobiDBLite consensus disorder prediction 350 391 - -
Lja3g1036 573 Pfam Fantastic Four meristem regulator 259 313 IPR046431 -
Lja3g1036 573 MobiDBLite consensus disorder prediction 52 111 - -
Lja3g1036 573 Coils Coil 95 122 - -
Lja3g1036 573 Coils Coil 203 237 - -
Lja3g1036 573 MobiDBLite consensus disorder prediction 185 204 - -
Lja3g1036 573 MobiDBLite consensus disorder prediction 52 93 - -
Lja3g1036 573 MobiDBLite consensus disorder prediction 185 279 - -
Lja3g1036 573 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 26 572 IPR021410 -
Lja3g1036 573 MobiDBLite consensus disorder prediction 205 225 - -
Lja3g1036 573 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 26 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1036 Lja-Chr3 10727748 10730569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1036 - - lja:Lj3g3v2928440.1 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1036 3 10727748 10730569 Lja3g1036 3 10727748 10730569 ECH
Lja3g3534 3 70068259 70069584 Lja3g1036 3 10727748 10730569 PCT