Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1025 ATGGTGGAAAAGAAAGTTGTCATCGTAGGTGGTGGTGTTGCCGGTGCTGTCCTGGCAAAAACTTTACAGCATCAAGCCAGTGTCACCCTTATTGATCCGAAGGAGTATTTTGAGATTCCATGGGCAACCTTGAGGGCAATGGTTGAGCCATCCTTTGCAGAAAGGATTGTAGTCAACCACAGAGAGTACTTCACAAAAGGTGACCTTGTCATATCCAGTGCCATCAACATATCTGAAACTGAAGTCTTCACTAAAGATGGTCAGCAGATTGCCTATGATTATCTTGTCGTTGCAACTGGCCACTCAGACTTTTTCCCCAAAACCAGGAGTGAAAGAATTGACCAATACAAAGGAGAAAATACAAAGATAAAATCTGCAAGTTCAGTGTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCGGCAGAGATTGCGGTTGATTTTCCTGATAAGAAGGTGACTATAGTGCATAAAGGGTCAAGGTTGCTGGAATACATTGGGCCAAAGGCTTCAAGGAAGACATTGAGGTGGCTCAAATCAAGGAAAGTTGATGTGAAACTAGAGCAGTCAGTTGACTTGAACTCCTCTACAGAGGGAAACAGGACATACCTAACTTCAATTGGAGAGACTATTGAAGCAGATGCACATTTTCTGTGCATAGGGAAACCACTTAGTTCATCATGGCTTAGTGAAACTATTCTTCATGATAGTTTGGATGGTAATGGAAGGATCCAGGTTGATGAACACTTGAGAGTGAAGGGAAGGAGCAACATTTTTGCAATTGGAGATATTATTGATGTTAAAGAAATCAAACAAGGGGTGTATGCACAAGGTCATGCTAAGTTGGTTGCTAAGAACCTGAGGCTATTGATAGAAGGAGGAGGCAAAGAGCATAAACTTGGAACCTACAAAGCACAACCAACAATATCTATTGTTTCACTTGGAAGGAAACATGGGGTTGCTCAGTTCCCATTCATGACAATCATTGGAAGGCTTCCTGGCATGATCAAGTCAGGAGATTTGTTTGTGGGGAAAACGAGAAAGGAATTAGGACTCGAACCTAATGTTAAAAAATCTTAA 1083 0.4211 MVEKKVVIVGGGVAGAVLAKTLQHQASVTLIDPKEYFEIPWATLRAMVEPSFAERIVVNHREYFTKGDLVISSAINISETEVFTKDGQQIAYDYLVVATGHSDFFPKTRSERIDQYKGENTKIKSASSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLRWLKSRKVDVKLEQSVDLNSSTEGNRTYLTSIGETIEADAHFLCIGKPLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGDIIDVKEIKQGVYAQGHAKLVAKNLRLLIEGGGKEHKLGTYKAQPTISIVSLGRKHGVAQFPFMTIIGRLPGMIKSGDLFVGKTRKELGLEPNVKKS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1025 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 360 - -
Lja3g1025 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 280 IPR023753 GO:0016491
Lja3g1025 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Lja3g1025 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Lja3g1025 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 230 - -
Lja3g1025 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Lja3g1025 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Lja3g1025 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 360 - -
Lja3g1025 360 Gene3D - 1 346 - -
Lja3g1025 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 124 148 - -
Lja3g1025 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 216 237 - -
Lja3g1025 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Lja3g1025 360 PRINTS Pyridine nucleotide disulphide reductase class-II signature 254 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1025 Lja-Chr3 10536431 10539080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1025 K22745 - gmx:100813980 578.556