Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1024 ATGGAGAAGCAGCAAGGTGGACCCAGAGTGGTGATCATTGGAGGCGGCGTCGCTGGTTCTATGGTCGCTAAATCGCTTCAATCCCATGCCCATGTCACCCTCATTGATCCGAAGGATTATTTTGAGATTACATGGGCAAGCTTGAGGGCAATGGTTGAGCCACCCATTGCGGAGAGGTCGGTGATCAACCATAGAGAATACTTCACCAATGGCAACATTATCACGTCCAGTGCTGTCAATGTGACAGAAACCGAAGTATTGACTGCAGATGGCAGTCAGATTGGCTATGATTATCTTGTTATTGCCACTGGCCATGCAGATCCTGTCCCCGTAAGTAAGAGTGAAAGGCTGAATCAGTATAAAGAAGAATATCAGAAGATAAAATCTGCTCATTCTATTCTGATTGTTGGAGGAGGTCCCACTGGCGTGGAACTTGCTGGGGAGATAGCTGTTGATTTTCCAGATAAGAAGCTTACACTAGTACATAAAGGACCAAGGCTGCTGGAATTCATAGGGGCTAAAGCTGCTGATAAGACTCTAAAATGGTTGAAATCAAAGAATGTTGAGGTGAGACTAGAGCAATCAGTTGACGTTAACACCGTCACAGATGGACATTATCGAACTTCAGCTGGAGACACCATTAAGGCAGACTGTCACTTCTTATGCATAGGGAAACCGCTTGCTTCTGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGCTCAGGGAAGGATTAAGGTAGATGAGAATTTGAAAGTCAAGGGCCGGAACAACATTTTTGCAATTGGTGATATTACAGATATTCCAGAAATGAAGCAAGGGTATTTGGCAAAGATGCAGGCTGAAGTGGTTGTGAAGAACTTAAAACTGATTATAGGTGGAGCAAAAGAATGCAGGATGGGAACTTACAAGCCACATTCAGGATTGGCAATAGTTTCACTTGGGAGGAATGATGCGGTGGCACAGTTCCCACTCTTGACAATCAGTGGAAGAATTCCTGGCTTGATCAAATCTGGAGATTTGTTTGTTGGTAAAACAAGAAAAGGATTGGGACTCAACCCTAATTAA 1074 0.4395 MEKQQGGPRVVIIGGGVAGSMVAKSLQSHAHVTLIDPKDYFEITWASLRAMVEPPIAERSVINHREYFTNGNIITSSAVNVTETEVLTADGSQIGYDYLVIATGHADPVPVSKSERLNQYKEEYQKIKSAHSILIVGGGPTGVELAGEIAVDFPDKKLTLVHKGPRLLEFIGAKAADKTLKWLKSKNVEVRLEQSVDVNTVTDGHYRTSAGDTIKADCHFLCIGKPLASAWLKETVLKNDLDAQGRIKVDENLKVKGRNNIFAIGDITDIPEMKQGYLAKMQAEVVVKNLKLIIGGAKECRMGTYKPHSGLAIVSLGRNDAVAQFPLLTISGRIPGLIKSGDLFVGKTRKGLGLNPN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1024 357 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Lja3g1024 357 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Lja3g1024 357 PRINTS FAD-dependent pyridine nucleotide reductase signature 132 150 - -
Lja3g1024 357 SUPERFAMILY FAD/NAD(P)-binding domain 5 288 IPR036188 -
Lja3g1024 357 Gene3D - 7 346 - -
Lja3g1024 357 PANTHER APOPTOSIS-INDUCING FACTOR 1 9 357 - -
Lja3g1024 357 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 9 357 - -
Lja3g1024 357 Pfam Pyridine nucleotide-disulphide oxidoreductase 9 272 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1024 Lja-Chr3 10531451 10534758 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1024 K22745 - gmx:100813439 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1024 3 10531451 10534758 Lja3g1024 3 10531451 10534758 ECH