Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1007 ATGACTTCCAACATTTCACTTGTAACAACTCCTCCTCCTCCAGAGGTGGACATGGGTTCCGATTCCAACGCGCCGACCACCGTCCGAGCCACGGTTGTTCAGGCCTCCACCATCTTCTACGACACTCCTGCCACTCTCGATAAGGCTGAGAGATTGCTGGCTGAAGCTGCTGGGTCTGGGTCAGAGCTTGTGGTGTTTCCAGAAGCGTTTATTGGCGGCTATCCGCGTGGTTCCACTTTTGGTATGGCTGTTGGAAACCGCACAGCCAAAGGTAGAGAGGAGTTCCGCAAGTATCATTCTTCAGCCATTGATGTTCCTGGCCCTGAAGTGGATAGATTGGCTGCAATGGCAGGGAAGTATAAAGTACATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACACTTTACTGCTCAGTTCTCTTCTTTGATTCTCAGGGTCATTATCTAGGAAAGCACAGGAAATTGATGCCAACGGCAATGGAAAGGGTTGTGTGGGGATTTGGTGATGGATCAACCATTCCAGTGTTTGAAACTCCTGTAGGAAAAATAGGTGCTGTCATTTGTTGGGAGAACAGGATGCCGCTTTTAAGAACAGCAATGTATGCGAAAGGTGTGGAGATATATTGTGCACCTACAGCTGATGCCAGGGAAGTGTGGCAAGCATCAATGACCCATATTGCTCTTGAAGGTGGATGTTTTGTTTTGTCTGCGAACCAGTTCTGCAGGAGGAAGGATTATCCACCCCCTCCAGAGTATGTTTTCGCAGGCACGGAAGAGGACCTAACACCAGATTCTGTTGTGTGTGCTGGTGGTAGTGTCATTATATCACCATTGGGTAATGTTCTGGCTGGACCGAATTATGAGGGGGAGGCACTCATTTCAGCAGACCTAGATCTTGGAGAAATAGCAAGAGCTAAGTTCGATTTTGATGTGGTTGGACACTATTCAAGGCCTGAAGTGCTTAGCTTGAGTGTGAAGGACCATCCAACAAACCCAGTTACTTTTGCATCAACTTCAACAAAAGTTGAAGACAAAACCAAGTAG 1047 0.4756 MTSNISLVTTPPPPEVDMGSDSNAPTTVRATVVQASTIFYDTPATLDKAERLLAEAAGSGSELVVFPEAFIGGYPRGSTFGMAVGNRTAKGREEFRKYHSSAIDVPGPEVDRLAAMAGKYKVHLVMGVIERDGYTLYCSVLFFDSQGHYLGKHRKLMPTAMERVVWGFGDGSTIPVFETPVGKIGAVICWENRMPLLRTAMYAKGVEIYCAPTADAREVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFAGTEEDLTPDSVVCAGGSVIISPLGNVLAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFASTSTKVEDKTK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1007 348 CDD nitrilases_CHs 28 326 IPR044149 GO:0003824
Lja3g1007 348 PANTHER NITRILASE 15 342 IPR044149 GO:0003824
Lja3g1007 348 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 185 198 IPR000132 GO:0003824
Lja3g1007 348 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 60 75 IPR000132 GO:0003824
Lja3g1007 348 PANTHER NITRILASE 15 342 - -
Lja3g1007 348 SUPERFAMILY Carbon-nitrogen hydrolase 26 326 IPR036526 -
Lja3g1007 348 Pfam Carbon-nitrogen hydrolase 29 307 IPR003010 GO:0006807
Lja3g1007 348 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 28 300 IPR003010 GO:0006807
Lja3g1007 348 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g1007 348 Gene3D - 19 312 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1007 Lja-Chr3 10338955 10343185 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1007 K13035 - gmx:100778110 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1007 3 10338955 10343185 Lja3g1007 3 10338955 10343185 ECH