Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1005 ATGTCCTCAATTCATCTTCATCACACCAACAACAACAACAACCTCAACAACGAAGGTATTGTCAACAAAATCAGGAAACGAGGTTGTTCCTCTTCCTCTTCCTCATCTCTGGTTCGAAAATACCGATTCAAGAGAGCAATTCTGGTGGGGAAGAAAGCAGGGTCGACCACCCCTGTTCCCTTGTGGAAAACTAGCACAACACCTCCTTCTATGGCTACTCCACCACTTCACCATTCTCAGTTGCCACCAAAAGACAAAGAGCTTTCTGTTTCAGCCAGAAAACTCGCTGCTACTCTCTGGGAAATCAATGATTTACCTTCTGCTGACCCAGTTCGAGGTAGAGACAAAGCTGCGAACTTTTCTAGTTCTAGATCGGGATTGTTGAGGCCACATATGTCAGATCCATCTCAGAGCCCTCTTTTAGAGAGAATGAAAGGGTTTGAAGGTGATGGCCATAAAAGAAGAGTGTCAGGGTTATCTCATCAGCTTCAATCTGGTGATTACTTGTTGGAGGGTTTAGATTCCTGTAGCAGTGCCCGTTTGATTGAGAAGAATTGTGGCAAATGCACTGATGGAGTGAAGAGCCGTCTGAAGGAAGCTAGAAGTGGCCTTTCTACATCGAAGAAGCTTCTAAAGGTATTAAATCAAGTATGCATTAGAGAGCATCAATCATCAACCAAGTCCCTTATCTTAGCTCTGGGTAGTGAGCTTGATCGGGTTTGCCACCAAATTGATCTACTCATCCATGAAGATCGCTCAAACCAGAATGACATGGAGTATGTCATTAAGTGCTTTGCAGAAGAAAAGGCTGCATGGAAAAGTAGAGAGCGAGAAAAGATTCATGATGCCTTAAAAAACGCAGCTGAAGAGCTTAAGGTGGAGAAGAAGTTAAGAAGGCAGACTGAGCGGTTGAATAAAAAGATTGCCAAGGAAATGGCTAATGTAAAAGCTTCCCATTTGAAAGCATCCAAAGAGCTTGAAAGGGAGAAACGTGCAAAGGAAATTCTAGAGCAAATTTGTGATGAATTAGCCAATGGTATTGGGGAAGACAGAGCGCAGGTAGAGGAATTGAAAAGGGAGTCGGCTAAAGTTCGAGAAGAGGTGGAAAAGGAGAGGGAAATGCTTCAGCTAGCAGATGTTTTGCGCGAGGAGAGAGTTCAGATGAAGCTTTCAGAGGCTAAGTATCAATTTGAGGAGAAAAATGATGTACTAGAAAAGCTGAGGAATGAGCTTGAGTGCTTTATGAGAACTAAAGATGAAGAAAATGGGGTTGTTTCTCCAGAGTGTGAAAAAATCAAGGATCTTGAGGCTTATTTCAACAATATCTATGGGGGATTACGAAATGCAGAGAAAGACAATGGTTTGGATGTTGGAGATGATGATGATGGAGATAATGACTCGGATGAGAGTGATCTTCATTCCATTGAATTAAGCATGGATAATAGAGGCTGCATGTGGAGTTATGCTTTTGAAGATGCTACTCAAGATGACTCAAAGAGAGTTTCAGTTGACAGTATAGGGAGAAAATCTCTCTCTGGAATTCAGTGGGGAAGTATTTGCTTCAACAAGAGAACTTCGAGTTTTAAGAAGAGGGATTTTGTCATCAATGATATTCTTGAAGGTTCTAATCATCTTGATCCTGAGACATCACTTGAACTTCTCTCACGAGCTCGGATACAAGATGATAAGGATGAAGCTCAGAGCAATAGGACAATCAAGGGTTTACAAGACTCCATGCCATGTTCCAATCCTGTTCAGAGAAATGATCAACTGTTAACTCTGCAATGCACTGGGGAAGAAGCTGGGAAAAATGCTCTTCTTGCCTTGGAAGGTGATACAATTTGA 1845 0.4211 MSSIHLHHTNNNNNLNNEGIVNKIRKRGCSSSSSSSLVRKYRFKRAILVGKKAGSTTPVPLWKTSTTPPSMATPPLHHSQLPPKDKELSVSARKLAATLWEINDLPSADPVRGRDKAANFSSSRSGLLRPHMSDPSQSPLLERMKGFEGDGHKRRVSGLSHQLQSGDYLLEGLDSCSSARLIEKNCGKCTDGVKSRLKEARSGLSTSKKLLKVLNQVCIREHQSSTKSLILALGSELDRVCHQIDLLIHEDRSNQNDMEYVIKCFAEEKAAWKSREREKIHDALKNAAEELKVEKKLRRQTERLNKKIAKEMANVKASHLKASKELEREKRAKEILEQICDELANGIGEDRAQVEELKRESAKVREEVEKEREMLQLADVLREERVQMKLSEAKYQFEEKNDVLEKLRNELECFMRTKDEENGVVSPECEKIKDLEAYFNNIYGGLRNAEKDNGLDVGDDDDGDNDSDESDLHSIELSMDNRGCMWSYAFEDATQDDSKRVSVDSIGRKSLSGIQWGSICFNKRTSSFKKRDFVINDILEGSNHLDPETSLELLSRARIQDDKDEAQSNRTIKGLQDSMPCSNPVQRNDQLLTLQCTGEEAGKNALLALEGDTI* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1005 614 Coils Coil 326 374 - -
Lja3g1005 614 MobiDBLite consensus disorder prediction 55 84 - -
Lja3g1005 614 PANTHER GB|AAF24581.1 17 582 IPR043424 -
Lja3g1005 614 MobiDBLite consensus disorder prediction 58 74 - -
Lja3g1005 614 MobiDBLite consensus disorder prediction 450 471 - -
Lja3g1005 614 PANTHER PLANT/F24K9-26 PROTEIN 17 582 - -
Lja3g1005 614 MobiDBLite consensus disorder prediction 455 469 - -
Lja3g1005 614 MobiDBLite consensus disorder prediction 118 132 - -
Lja3g1005 614 Coils Coil 390 424 - -
Lja3g1005 614 Coils Coil 284 314 - -
Lja3g1005 614 MobiDBLite consensus disorder prediction 113 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1005 Lja-Chr3 10323090 10326285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1005 - - gmx:100775454 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1005 3 10323090 10326285 Lja3g1005 3 10323090 10326285 ECH