Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0999 ATGAGGGTTCGAGTGGTGGTCCTTCTTCCATCCCTGGTTGTGGTGGTGGGTCGTGTCCGCCCGCCACCTCCTGTTCCGCCGCCAAAGCCTGCTTCCCCTGCTAACTTGAATTCAAGGAGGAATGTGTCCGGGGCAGCTTCGAATTCGGGCTGTGTAGGAGGATCTTCTAGGAGAGCATCTGCGTGGCCGGTTGTTTCAGCAAGGACCTCCCCTGCTGGGTCTCGACCTTCTTCTCCCAGGTCCCATAATGAAAGTGAGGGGTACAATAGTGCTGACGAGCAGAAGCCGTGTTTTGTTTCCTCTTATGATGATTTTGAAAGGGAGCGGCAGTTTGAAATTGATATAAGAAGGGCAAAGGGTTATGAAGTAAAAAAAATGATGGAGGATGGAAATTGTCTTTTCCGTGCTGCTGCAGATCAGGTGTACGGGGACTCTGAGTTGTATGATTTGGTCAGACAGATGTGCATTGATTATATGGAGCAGGAGAGGGATCATTTTTCTCAATTTATAACTGAAGGCTTCACATCATACTGTAAGAGGAAGAGAAGAGATAAGGTCTACGGAAACAATGTTGAGATCCAAGCTATGTGTGAAATGTATAATCGTCCTATTCATATATACTCCTATTCAACAGAACCCATCAATATCTTTCATGGAAGCTATAACACTGATACACCGCCAGTTCGGCTGAGTTATCATCATGGGAATCATTACAATTCTCTCGTTGACCCGCGGCGTTTGACAATTGGTGCTGGGCTTGGGTTCAGCTGTCTTCGTGGAAGTAATGTTGACAAAGACCAAGTCAAGGCTGCTATTAAAGCTCAACAAGATCAACATGTCAATAATGCACTCTTAGCCGAGGGACGATTTTACTCTGATCTTGAGCTGACAGAGAAGGAAATTGAACGCATGGTGATGGCAGTTTCTCGAGCTGAGTATCTTGCTGATGGTACATTTAAGCAACAGCTTGGCCATATAGAGTCCTCCACCTCAAATGCTGAACCATCATCTTCCGGAGCAACAGGATCATCTGGCACTGATCTCAAGATGGAACATGGCAAAGAGCATGGTTCTGATCTTAGTAGCAGCATGCAGATGTTACTATCAATGGGATTTAGTTACCTCCAAGCGATTGAGGCTTACAGCATATTTGGGGATGATGTTGATTCTATGATTTGTTACCTGTTAGAAACTGGCAGTAGCAGCAGACGTAAAGGCAAGGCAACTGAATGA 1233 0.4566 MRVRVVVLLPSLVVVVGRVRPPPPVPPPKPASPANLNSRRNVSGAASNSGCVGGSSRRASAWPVVSARTSPAGSRPSSPRSHNESEGYNSADEQKPCFVSSYDDFERERQFEIDIRRAKGYEVKKMMEDGNCLFRAAADQVYGDSELYDLVRQMCIDYMEQERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSTEPINIFHGSYNTDTPPVRLSYHHGNHYNSLVDPRRLTIGAGLGFSCLRGSNVDKDQVKAAIKAQQDQHVNNALLAEGRFYSDLELTEKEIERMVMAVSRAEYLADGTFKQQLGHIESSTSNAEPSSSGATGSSGTDLKMEHGKEHGSDLSSSMQMLLSMGFSYLQAIEAYSIFGDDVDSMICYLLETGSSSRRKGKATE* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0999 410 MobiDBLite consensus disorder prediction 326 345 - -
Lja3g0999 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 357 398 IPR015940 -
Lja3g0999 410 MobiDBLite consensus disorder prediction 70 85 - -
Lja3g0999 410 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 18 374 - -
Lja3g0999 410 SUPERFAMILY Cysteine proteinases 108 244 IPR038765 -
Lja3g0999 410 MobiDBLite consensus disorder prediction 326 359 - -
Lja3g0999 410 Gene3D - 103 254 - -
Lja3g0999 410 Pfam OTU-like cysteine protease 129 238 IPR003323 -
Lja3g0999 410 SUPERFAMILY UBA-like 356 399 IPR009060 GO:0005515
Lja3g0999 410 MobiDBLite consensus disorder prediction 17 94 - -
Lja3g0999 410 MobiDBLite consensus disorder prediction 34 55 - -
Lja3g0999 410 ProSiteProfiles OTU domain profile. 121 244 IPR003323 -
Lja3g0999 410 MobiDBLite consensus disorder prediction 17 33 - -
Lja3g0999 410 PANTHER OTU DOMAIN CONTAINING PROTEIN 18 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0999 Lja-Chr3 10264773 10270466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0999 K12655 - gmx:100809162 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0999 3 10264773 10270466 Lja3g0999 3 10264773 10270466 ECH