Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0998 ATGAGACCGATTCAGCTTCCTGAACCGCCTAGCCCTACCGCCCGGAGAGGCACCGCCGAGATCTTCGAATCGGGTGTCCACACCTTCGTCCGACGCGCCGTCGTAATTGGCAACGGTTTCCCCTCTTCCGAGAATCAGAGTATTGGATTGCTTCGCGCCCTTGGACTCTCAGACAAGTATCACTTATATCGGGTTACGAGGCCTAAAGAGGGAATTAATGAGTGGCTGCGATGGCTTCCAGTCTCATTCCATAAAAGAATATATTTTATAGTAAGAATGATTCACAGTTATTCTCAGCTTGTGTTGAAATCTCAAGAAAGGAAGCTTAAGCCTTTACCTTCAGGAAATGGTGTCAGTGCAGGCTTGTTAGATGTCTTAGAAGCTGATGTAAAGCAGATAGCCAATCTTGCTCGGGAAACTTATGAGAAGGAGGGACCTTTGTTGGTGGTTGCATGTGGAAGGGACACCATTTCTGCTGCGAGTTCTATAAAACGTTTAGCGTCTGAGAATGTTTTTGTTGTTCAGATACAACATCCAAGATTGCATTTGAATAGGTTTGACATGGTAATTGCACCTAAGCATGATTATTATCCTTTGACTCCAGAAGGACAAAAACAGGTTCCTCGGTTTCTTCGAAGTTGGATAACTCCACGCGATCCTCCAGATAGTCATGTGGTTCTCACCACAGGAGCCCTACATCAAATAGATTTTACTTCAATACGTAATGCTGCTGCTACATGGCACGATGAGTTTGCACATGTTCCCAGGCCCTTGCTTGTCGTCAACATTGGAGGACCATCAAGCAACTGTCGATATGGCGTAGACCTTGCAAAGCAGTTAGCATCTTCTTTGCTCAGTGTTCTAGTTAGTTGTGGGAGTGTTAGAATATCCTTTTCAGAGAGGACTCCACAAAAGTTTTGCAATATTATAGTGAAAGAACTCGGAAATAACCCAAAAGTTTATATTTGGGATGGGCAAGGACCTAACCTGCACATGGGCCATCTAGCGTGGGGCGATGCATTTGTTGTCACAGCAGATTCAGTTAGTATGATAAGCGAAGCTTGCAGCACCGGGAAGCCAGTCTATGTTGTGGGAGCTGAGCGTTGCAGATGGAAGTTCACGGAATTCCACCAATCATTGAGAGAGATGGGAGTTGTTCGGCCTCTTACGGGTTCTGAGGATATATCAGAAAGTTGGAGCTATCCACCCCTTAACGATACTGCCGATGCAGCTAAACGGGTTCATGAAGCACTTGCTGCCCGAGGGTGGAAACTGAAGATATAG 1284 0.4579 MRPIQLPEPPSPTARRGTAEIFESGVHTFVRRAVVIGNGFPSSENQSIGLLRALGLSDKYHLYRVTRPKEGINEWLRWLPVSFHKRIYFIVRMIHSYSQLVLKSQERKLKPLPSGNGVSAGLLDVLEADVKQIANLARETYEKEGPLLVVACGRDTISAASSIKRLASENVFVVQIQHPRLHLNRFDMVIAPKHDYYPLTPEGQKQVPRFLRSWITPRDPPDSHVVLTTGALHQIDFTSIRNAAATWHDEFAHVPRPLLVVNIGGPSSNCRYGVDLAKQLASSLLSVLVSCGSVRISFSERTPQKFCNIIVKELGNNPKVYIWDGQGPNLHMGHLAWGDAFVVTADSVSMISEACSTGKPVYVVGAERCRWKFTEFHQSLREMGVVRPLTGSEDISESWSYPPLNDTADAAKRVHEALAARGWKLKI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0998 427 PANTHER OS02G0535700 PROTEIN 1 426 IPR009367 -
Lja3g0998 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 137 367 - -
Lja3g0998 427 Pfam Mitochondrial fission ELM1 43 418 IPR009367 -
Lja3g0998 427 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0998 Lja-Chr3 10259774 10264146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0998 - - gmx:100777791 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0998 3 10259774 10264146 Lja3g0998 3 10259774 10264146 ECH