Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0983 ATGTCAACTGTGAATGTTTCTCCCAGTTGCATGTTTCAAACTGCAAACCGAAATCTATCCACTGTTGCTACCGCAGTAAAGTGCCCTATCTCTTTTGGGTCTGTGAAGAGTGTTTCCAGATCTTTTGGCTTGAAGTCATCCACTCCGTCTAGAGTCACTGCCATGGCTGCTTACAAGATTAAGCTGGTTGGCCCAGATGGAAAAGAGAACGAGTTTGAAGCCGAGGATGATGTTTACATCTTGGATGCAGCAGAGAATGCCGGAGTCGAACTTCCTTATTCGTGCCGTGCTGGAGCCTGCTCTACCTGTGCTGGGAAGATTGTTACTGGTTCAGTGGATCAGTCTGATGGCTCATTCCTGGATGACAATCAGCTGAAGGATGGCTTTGTGCTCACCTGCGTCTCCTATCCAACTGCAGACTGTGTAATTGAAACTCACAAGGAAGGAGAACTCTACTGA 459 0.4728 MSTVNVSPSCMFQTANRNLSTVATAVKCPISFGSVKSVSRSFGLKSSTPSRVTAMAAYKIKLVGPDGKENEFEAEDDVYILDAAENAGVELPYSCRAGACSTCAGKIVTGSVDQSDGSFLDDNQLKDGFVLTCVSYPTADCVIETHKEGELY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0983 152 PANTHER FERREDOXIN 1 152 - -
Lja3g0983 152 Pfam 2Fe-2S iron-sulfur cluster binding domain 65 138 IPR001041 GO:0051536
Lja3g0983 152 Gene3D - 55 152 IPR012675 -
Lja3g0983 152 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 56 152 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lja3g0983 152 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 58 149 IPR001041 GO:0051536
Lja3g0983 152 CDD fer2 65 144 IPR001041 GO:0051536
Lja3g0983 152 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 95 103 IPR006058 GO:0051537
Lja3g0983 152 PANTHER FERREDOXIN 1 152 - -
Lja3g0983 152 SUPERFAMILY 2Fe-2S ferredoxin-like 53 151 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0983 Lja-Chr3 10092740 10094693 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0983 K02639 - gmx:100785611 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0983 3 10092740 10094693 Lja3g0983 3 10092740 10094693 ECH