Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0981 ATGGCTGAGCCCCACAACCTCATTCTCCTTCTTCTTCTCTGCGCCACTCTACAATCTTCACCTCGTTTCATTGCAGCTTCATCCTCGGATCACCTCTACAACGTTGGAGACAGTGTCCCATTGTTTGTCAACAAACTAGGACCCTTCAACAATCCTAGTGAGACATATGAATTCTATGATTTGCCATTCTGCAATCCAGACCCAATTGTGAGAAAGAAAGAGTCCCTTGGGGAAGTTCTCAATGGTGATCGTTTGAGCAATGCTTTGTATGAGTTCAAGTTTAGGAAGGACAAGATTGATGAGACCTTGTGCCAGAAGAAGCTTACAATTGATCAAGTTGCAAATTTGAAGCAAGCTATTAACCGTGATTTTTACTTCCAGTTTTACTTAGATGATCTTCCTTTGTGGGGGTTCATTGGGAAAATTGAAGTGGATAGATGGACTCCTGGTGGGGGAGGGATAAGCTATTACCTTTTTACACATGTTCAATTTGATGTTCTTTACAATGGGAACCAAGTCATTGAAGTAAATGCATTTGGTGATCCGAATCGCGGAGTGGATATAACGAAAGATGTTGACATTGATGTTAAGTTCACTTATTCTGTTACCTGGAATGCCACTGAAGTGCGATTCGAGAACAGGATGGACAGATACTCAAGAGCTTCATCGCTGCCTGTCTATCGTCAAGTTCATTGGTTCTCATTCATTAACTCAATAGTCATCATTCTGCTTTTGGTTGGTTTGCTTGCCCTACTTTATATGCAACATTTGAAGAGCGATTTGAGAAAGTATTCTAATGCAAATGAGGAAGATAGAGAGGTTGGTTGGAAGTCCATCCACAGCGATGTATTCAGACATCCTCCAAACTCATCCTTACTTTTTGCTGTCGTGGGAACCGGTACTCAATTGCTAATCTTGCTCTTTGTCTTACTATTTCTTGCATTTATCGGCACTCTGTATCCCTACAATCGCGGAGGACTGTTAAATTATCTTGTCCTGCTATATGCTCTTTTATCTGTTTTTGCTGGGTACTCAACAGCATCCTTTTATGGCCAATTTGCTGAGAATGGATGGGAAAAGAGTGTTAGTCTAGCAGGGATTATTTACATGGGACCAGTGTTTGTTGTAGGCTCTGTCCTCAACATCATTGCAATATCATACGGGGCCACGACTGCACTCCCGTTGGGCTCGATCGTTGTGATTCTTGTTTCACTCGCATTTGGTGCCATCCCCTTGCTTGCATTGGGTGGATTGATTGGATATTGCTTTAGATCCACATTTCAGGGCCTTTCCACTACAAAGAGGCATCCTAGAGAGATTGAACAACTTGCTTGGTATAGGAGGACACCATTTCAAATGTTTATTGGGGGGTTTGTGCCTTTTAGTGCAGTTGTCTTGCAATTACACCAAGTGTATGCTAGCATGTGGGGCTACAAGATATATACTCTTCCTAGCATTTTGTTTGCCACACTCATCACTGTCATTGTGATTATTGCTCTAGTCAATATTGGTTTGACATACATTCAACTATCTGCAGAAGACCATGAATGGTGGTGGAGATCTGTGCTGTGTGGTGGATCAACATCCATTTTCATGTTTGGGTACTGTATCTTCTTCTATGTGAGATCAAGTATGAGTGGATTCTTACAGCTATCCTTCTTTATTGGCTACAATGCATGCATATGCTATGCTTTCTTCTTAATATTTGGTGCGATCAGTTTCCGAGTGTCATTGCTATTCCTTCGCTGTATATACCATGATGTTAAAAGAGAGTGA 1776 0.4155 MAEPHNLILLLLLCATLQSSPRFIAASSSDHLYNVGDSVPLFVNKLGPFNNPSETYEFYDLPFCNPDPIVRKKESLGEVLNGDRLSNALYEFKFRKDKIDETLCQKKLTIDQVANLKQAINRDFYFQFYLDDLPLWGFIGKIEVDRWTPGGGGISYYLFTHVQFDVLYNGNQVIEVNAFGDPNRGVDITKDVDIDVKFTYSVTWNATEVRFENRMDRYSRASSLPVYRQVHWFSFINSIVIILLLVGLLALLYMQHLKSDLRKYSNANEEDREVGWKSIHSDVFRHPPNSSLLFAVVGTGTQLLILLFVLLFLAFIGTLYPYNRGGLLNYLVLLYALLSVFAGYSTASFYGQFAENGWEKSVSLAGIIYMGPVFVVGSVLNIIAISYGATTALPLGSIVVILVSLAFGAIPLLALGGLIGYCFRSTFQGLSTTKRHPREIEQLAWYRRTPFQMFIGGFVPFSAVVLQLHQVYASMWGYKIYTLPSILFATLITVIVIIALVNIGLTYIQLSAEDHEWWWRSVLCGGSTSIFMFGYCIFFYVRSSMSGFLQLSFFIGYNACICYAFFLIFGAISFRVSLLFLRCIYHDVKRE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0981 591 Pfam Endomembrane protein 70 55 547 IPR004240 GO:0016021
Lja3g0981 591 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 13 590 IPR004240 GO:0016021
Lja3g0981 591 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 13 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0981 Lja-Chr3 10081953 10086518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0981 9 591 Miscellaneous Gene Families AT2G01970 48.722 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0981 K17085 - gmx:100818419 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0981 3 10081953 10086518 Lja3g0981 3 10081953 10086518 ECH