Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0980 ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATACTGTCCCACCTGAGCGCTGCGCGAGACGTGGTCGTAGCCTCTGCAACATGCAGGAAATGGCGCCTGGCGTGCTGCAAGCACCTCAACACGCTCTCCTTCAGCTCGGTTGATTGGCCTGTTTACCGCGATTTGACGACGACCCGCCTCGAGATTTTGATCACAGAGACCATTTTTCAGACCTCAGGGTTGCAGTCCCTCTCCATTTTGATGGATGATGTGGATGCATTCTCGGCTTCAACTGTTATTGCTTGGCTCATGTACACCAGGGAGTCTCTGAGGCAATTGTTCTATAATGTGAGGACCACGCCTAATGTTAACATTCTCGAAATATGTGGCAGGCACAAGCTGGAAATACTTGATCTGGCTCATAATACTATTACGGGGGTTGAGCCTATTTATCAGAGGTTCCCTTGTTTGAAATCTCTTTCATTGAGTTATGTCTGTATATCTGCTTTGGATCTTAATCTTTTGTTGTCTGCATGTCCCAAGATTGAAGCTTTGGAACTTGTCAATCCAGAGATTGCAATGTCCGATGCTATGGCAACTATTGAACTGAGTAGCTCGACGCTGAAGAGTGTGTATTTTGAAGCAATCAGTATGGACAAGATTATATTGGAGGCTGATGGGATTGAGAGCTTGCACTTGAAAGATTGCGCACTTGAGATTTTCGAACTCATTAGCAAGGGGACCTTGAAGCATTTTAGGATTGACGATGTTAGTGTTATACATCTTGATATTGGTGACACAGTTGAGAATCTTGAGAGTGTGGATATCAGCAACTTCACAATGATATGGCCAAAATTTTACCAGATGATTTCGAGGTCATCAAACTTGAAGAAGTTCAGGCTTTGGGATGTGATGTTTGACGACGAGGATGAGGTTGTAGATTTAGAAACAATTGCCAGTTGCTTTCCACACCTGAACCATTTATCTCTGAGTTATGATGTGAGATACGGAGTGGTTCACTATGGTTTACTAGGCGCTGCCTATCTGGAAAATGTTGTTATCTTGGAGCTTGGGTGGAATGTGCTCAATGATCTTTTCTCCCACTGGGTTGAGGGGCTGCTTAAGCGATGCCCCAATCTCAAGAAGTTGGTCATTCATGGGGAGGTTTCCGAGGCCAAGTCTGATGAAGAATGCAAAATATTTGCGAATTTCACCAGGTCCATGATTCAGCTGATGAGAAGATACACACATGTAGATCCACATTTTAATTTTGAATAG 1260 0.4413 MDQLPVEVIGNILSHLSAARDVVVASATCRKWRLACCKHLNTLSFSSVDWPVYRDLTTTRLEILITETIFQTSGLQSLSILMDDVDAFSASTVIAWLMYTRESLRQLFYNVRTTPNVNILEICGRHKLEILDLAHNTITGVEPIYQRFPCLKSLSLSYVCISALDLNLLLSACPKIEALELVNPEIAMSDAMATIELSSSTLKSVYFEAISMDKIILEADGIESLHLKDCALEIFELISKGTLKHFRIDDVSVIHLDIGDTVENLESVDISNFTMIWPKFYQMISRSSNLKKFRLWDVMFDDEDEVVDLETIASCFPHLNHLSLSYDVRYGVVHYGLLGAAYLENVVILELGWNVLNDLFSHWVEGLLKRCPNLKKLVIHGEVSEAKSDEECKIFANFTRSMIQLMRRYTHVDPHFNFE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0980 419 Gene3D - 2 40 - -
Lja3g0980 419 PANTHER - 1 417 - -
Lja3g0980 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Lja3g0980 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Lja3g0980 419 SUPERFAMILY RNI-like 70 381 - -
Lja3g0980 419 SUPERFAMILY F-box domain 1 51 IPR036047 GO:0005515
Lja3g0980 419 Pfam F-box-like 2 38 IPR001810 GO:0005515
Lja3g0980 419 Gene3D Ribonuclease Inhibitor 111 407 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0980 - - gmx:100804357 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0980 3 10079312 10081134 Lja3g0980 3 10079312 10081134 ECH