LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g0978	ATGTTGAGTTCTGGAAATAACTTAAACAGCAGCAGCGGCAGCGGGGCAGCAGATATGCCGCCCTTGCCCCAGTGTTTGCCACTAGATTCGATTACGGTAGGACATCAGAAATATACTGGAGAGCTAAGGAAGGTTTTAGGTGTTTCTGCTGGAAACACATCAGAAGACCATTCTTTTGGAGCTCAACATCCTAAATCAGTGGCCCCAGGAGCCTCAGGGGAGCTAAAGCACTTAAAAGAAAGTGTACAAGATGCCTCCAGAAAGGCAAGGGATAGATCCAAAATGTTTCGGGAATATATATCCAAATTGGATAGGTTCAGGGAGGCCTCAAACTCAAAGAAAAGACAAAGGGCTGATACATCAAGTGACAGGGGAGGTGGAGTAAACTTAACAAAGATGGGTAGCCAGATCCACAAAACCCCTAATGATAGTCTGACTCAGAGATCAGAGGTCAAGACCTCAAATGCAATGCTGAACAAGCGAATGCGCACGTCAGTAGCAGATCTGTGGGAGGAAAGTAGGTCTGCTGCTATTGGAAGGCAGCAGATGCCCACAGAGAAGGATGGAAATTTAATTCAGACACTTGGTGGGGGCTCTGTTCAAAATGAGGAGAAAACTCGCAGATTACTTGCTGGAGGTGAAGGATTGGATCATAAGATAAAAAAGAAGAGGTCTGTTGGAGCTGTAGGCAACAGAGTTATAACTGGTGAAAGGGACATAAAGCGAGCTACTATTCCAAAGACAAATACTGATTTGAAGACACGGCTTTATGATGCTCAGGGTTTTAGATTGAAGGCACTTGCTGGATCTAGTGGAAGCAACAAGGCTGAGAGCTTTTCAGAGCCTACTAATACAGGTGTGCATTCAATGCTTACTAGTGAGCAAGGTGTTTCTTCTCTTCACAGAGACCACATAGCTGAGCAGAGAGTTGTGCTGAAAAGAAGCAACAGGGCAAACACTCAGGAGGACCCTGCGAGCAGCCCTAACACACTAATTAAAACCAAGGCATCTCGGGCACCAAGAACGGGTTCGGTTAGTGCGCTAGAATTGTCCAACATTCAACCTTCATCTGGAACTTTTCCAGGTTCTTCTATGCATCCAATGACCCAGTGGGTTGGTCAGAGGCCACCTAAAAATTCACGCTCACGAAGAATGAAAGTAGTTTCTCCTGCCTCACGCAATCTTGAAGTTCAGGTCTCATCTGAAGGCTGTCTGACTTCTGATTTCAGTGTTAAAGGTTCTTCTGTTGGCAACAATGGATTTCAACTAGCAAGCAGTGTAGACAACAGTACTCCAAAATATAAAAGAACACCTGATGATATTTCATCTCCATTTGGACTATCTGAAAGTGAAGAATCTGGAGCTGGGGAAAACAGAACACAAGAGAAAGGAGTGAATGGCAGTGACTTTGCTGTGGCTGTTGATAAGGATGGAGCTTCTATATTACAAAGGAGGAAGAATAAAATACCAACAGATGAACCTGGAGATAGTGTGCAGAGACAAGGAAGAACTGGAAGGAATTTATCGTTAACAAGGCCCGACCTTCCTCCAGGGAGGGAGAAGTCAGAGAATCCACCAATTCTGAAGCCAGTACTAGAATTGAGGGCTAATGATAAGAGTAAAACCAAATATGGGCGCCCTCCTACGAAAAAGCAGAGAGAGCGTAAAGTTTCGACTCGTGTAGGGAAGCAACTGATCATTGGTTCTGAATTTGGAGGTGAATCTGATGATGATCGCGAAGAATTAGAGAAAGCTGCAAATGCTGCTCGTAATGCTAGCAAACTTGCTTGTTCGAGTGCATTTTGGAATAAAATGGAGTGTATTTTTGCTTCTATCAGCTTGGATGATGCATCTTACTTGAAGCAACAGCTCAATATTGCTGAGGAATTCAATAAAAATTTATCTCATATGTTTGGGACAGATCATGATATCTTGGGTGTTGTTATAAATAACAAAACCACTCAAGGTTCAGAGGAAAGAAAGAGAAGCCACTGTGATGAAGAATCAACTAAGTGTGATGCTTTAGATGGGAAGAATGAAATGGGAAGATTGGACAAGGTTACCCCATTATTCCAAAGACTTCTTTGTGCTCTTATTGAGGAGGATGAAAGTGAAGAATCATATCACCAAAGCGAAGGAAAGAATATATCTCGACAGTGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAATTGATTTTGAACCCAAAGATCGGGATAGAATGGACTCTGAAGTTGAATCAAAGGTGGATCTTCAAATTCAGAAAAATTGCATGTTGGACAGACTATCTTGTGATAAGAGTACCACATCCAATACATTTAGGTATCCAAATACATCCAGTTCCTTGCAAAGCACTGGAGTTTGGCAGGGAGATGAAGAACTTTCCCTTTCAGATATTACACTCACCAGTGAAATATGTTCAAATGATCTTGATCAACTGCAGCCTGCTGAAATAAGTGTTCCTAGCTTTCCTTCTCCTGATGGACCGTATCAGCTGATGTCTCTGGATGACAGGCTGCTGCTTGAGTTGCAGAGCATTGGCTTATATCCTGAAATATTGCCTGATTTAGCTGAGGAAGATGAAGCTATAAGTCAAGACATTGTGAAACTTGAGAAAGAACTATATGAACAGAATGGGAGGAAGAAGAAAAACTTGGACATAATTGACAGATCTATTCAAAAAGGGAGGGATATGGAAAGGCGGAATATTGAGCAAGCTGCCTTTGACCATCTTACTGAAATGGCTTACAGAAAGAGATTGGCATGTCGTGGAAGCAAGAATTCAAAAGGTGCTGTTCACAAAGTGCCAAAACAAGTTGCTTTGGCTTTTCTCAAACGCACGCTTGGAAGATGTAAAAGATATGAAGAAGCTGACATTAGCTGCTTTAGTGAACCTACCCTACAAAATATCATGTTTGCCCTCCCTTCACGTGAGAGTGATGCACAACCTGGTGATTGCATTGTTTCTGGAACAGCCAGTAATACATGTTACAAAGCTTCTCCTCAAATTGAAGTCAGAAAATCAGGTGCGGTTTCTAGTACTTCTGAGAAATATGATGTCCAGATAGATCATGCAGACAGGGGACTGGTTGATTCTTTTCAAGGTTCAATTCACTCATCAGAACAAGCATCATCTAAGAATGGGTCTGTGTTTATCAAGGAGAAGAAGAGGGAAATGCTGGTCAATGTTGTTGTCAGTGGTTCCTCTTCAAGAGCATCAAAATTTGATGGTGCTGTTCCTGGTGGAGTGAAGGGAAAGAGAAGTGAGAGGGATAGGAACCAGAGCCGAGATCAGACCAGACAAAATTCTATTCCCAGAGCTGGACGCTTGTCACTGGACAGTAGCCAAAATGAGAACAAACCAAAAGCTAAGCCCAAGCAAAAGAATACCGCATATGGACATGATAGGTTTATGGAACCAAAGGAATCTGCTTGTTTACCAATTCATGGTTCTAGTCTATCTGTGGTTGGTAACCAGGACACTTCTCAAGCAAAGGAATCAGCTGACCTTGGGAATTTGCCGCTACCTGATTTAGGTTCTATCGAAGAATTTGGTGTATCTGGTGAGCTTGGTGGGCCGCAAGATCTTAGTTCTTGGTTGAACAACTTTGATGACGATGGTTTGCAAGAGGATGATTGTATAGGCCTGGAAATACCAATGGATGACCTATCAGACTTAATGCTTATGTGA	3696	0.4253	MLSSGNNLNSSSGSGAADMPPLPQCLPLDSITVGHQKYTGELRKVLGVSAGNTSEDHSFGAQHPKSVAPGASGELKHLKESVQDASRKARDRSKMFREYISKLDRFREASNSKKRQRADTSSDRGGGVNLTKMGSQIHKTPNDSLTQRSEVKTSNAMLNKRMRTSVADLWEESRSAAIGRQQMPTEKDGNLIQTLGGGSVQNEEKTRRLLAGGEGLDHKIKKKRSVGAVGNRVITGERDIKRATIPKTNTDLKTRLYDAQGFRLKALAGSSGSNKAESFSEPTNTGVHSMLTSEQGVSSLHRDHIAEQRVVLKRSNRANTQEDPASSPNTLIKTKASRAPRTGSVSALELSNIQPSSGTFPGSSMHPMTQWVGQRPPKNSRSRRMKVVSPASRNLEVQVSSEGCLTSDFSVKGSSVGNNGFQLASSVDNSTPKYKRTPDDISSPFGLSESEESGAGENRTQEKGVNGSDFAVAVDKDGASILQRRKNKIPTDEPGDSVQRQGRTGRNLSLTRPDLPPGREKSENPPILKPVLELRANDKSKTKYGRPPTKKQRERKVSTRVGKQLIIGSEFGGESDDDREELEKAANAARNASKLACSSAFWNKMECIFASISLDDASYLKQQLNIAEEFNKNLSHMFGTDHDILGVVINNKTTQGSEERKRSHCDEESTKCDALDGKNEMGRLDKVTPLFQRLLCALIEEDESEESYHQSEGKNISRQCASDDSHCGSCNQIDFEPKDRDRMDSEVESKVDLQIQKNCMLDRLSCDKSTTSNTFRYPNTSSSLQSTGVWQGDEELSLSDITLTSEICSNDLDQLQPAEISVPSFPSPDGPYQLMSLDDRLLLELQSIGLYPEILPDLAEEDEAISQDIVKLEKELYEQNGRKKKNLDIIDRSIQKGRDMERRNIEQAAFDHLTEMAYRKRLACRGSKNSKGAVHKVPKQVALAFLKRTLGRCKRYEEADISCFSEPTLQNIMFALPSRESDAQPGDCIVSGTASNTCYKASPQIEVRKSGAVSSTSEKYDVQIDHADRGLVDSFQGSIHSSEQASSKNGSVFIKEKKREMLVNVVVSGSSSRASKFDGAVPGGVKGKRSERDRNQSRDQTRQNSIPRAGRLSLDSSQNENKPKAKPKQKNTAYGHDRFMEPKESACLPIHGSSLSVVGNQDTSQAKESADLGNLPLPDLGSIEEFGVSGELGGPQDLSSWLNNFDDDGLQEDDCIGLEIPMDDLSDLMLM*	1232

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	122	144	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	479	493	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	1073	1133	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	313	393	-	-
	Lja3g0978	1231	PANTHER	SPECTRIN BETA CHAIN, BRAIN	1	1230	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	1	28	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	49	93	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	1100	1120	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	426	559	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	271	287	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	107	121	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	313	377	-	-
	Lja3g0978	1231	PANTHER	OS05G0107300 PROTEIN	1	1230	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	268	287	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	77	93	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	534	559	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	1085	1099	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	1	17	-	-
	Lja3g0978	1231	MobiDBLite	consensus disorder prediction	107	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g0978	Lja-Chr3	10054779	10065491	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g0978	-		-	gmx:100784211	1908.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja3g0978	3	10054779	10065491	Lja3g0978	3	10054779	10065491	ECH