Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0971 ATGCCGAAGGTTCCAGAAGAAAAAGATGGATCTGAAAAGGAAACACCCAAAATCTCCATCGATCCCTTTCCACATTTAGCATCAACCAAACCCTATTTTCTTCCCTGGAAGCCGATGAAACGCACCGTTCGGCCTCTATTCGTTCTCCTCCTCCTTCTCGTCTTCATCGCCACGCTCACCTCACGCGCTGTCGTCGGCCGTCGCCTCCTCTCCATCGAGCTCGAAACCCGCGTCATCAACCACAACCCGCCGCCGCAGCTCAACACCACGCTCCTCCACCACGCCGCAGTCGAGATCGGCGAGGCAAAGCTCCGGCAAGAGATCCAACAGCTCCTCGACGGCAACTTCGGCAGCCAGGCGCGCCACCGTACTTTCGTGTCCTGGCGGCGGTTTATTCACCACGACGTCGACAACAGGAACGGCCTCCCGGCGAATCTCCGGTCGCCGTTGTTCTACCGATACTGGCTGGACTTCCGGCGAGTGCTCCATGACTGGTCCCGGAAGCGCCGGTTCCAGCCCGGAATCATGTCGGAGCTGACCCGGTCGGTGAAGATTCCCCTCGACCGGTACAACAACGCGGCGGCGGCGGCGGGTTCCGGTGAGAAAAGGTACTCTTCTTGTGCTGTTGTTGGTAACAGTGGAATTTTGCTTAACAGTAACCATGGTTCCTTGATTGATGCACATGAAGTTGTGATGAGGTTGAACAATGCAAGGGTTGAAAATTATGAGTACAAGGTTGGGAAGAAAACCAGCATTTCGTTTGTGAATAGCAACATCTTGCACTTGTGTGCAAGAAGAGCAGGGTGTTTTTGTCACCCTTATGGTCCAAATGTGCCTATTGTCATGTACATTTGCCAAGCCATGCATTTCTTGGATTACACTGTGTGCAATGGATCACACAGGGCGCCGTTGTTGGTGACCGATCCGCAGTTCGACGTGTTGTGTGCTAGGATTGTGAAGTACTATTCATTGAAGAGGTTTGTGGAGGGGACAGGGAAGGGTTTGGAGCAATGGGGTTCTGCTCATGATGGGGCTCTTTTCCATTACTCATCTGGGATGCAGGCTGTGATGTTGGCTTTGGGAATCTGTGATAGAGTTAGCATATTTGGGTTCGGGAAATCGAATTCGGCTAAGCACCATTATCACACTAACCAGAAGGTTGAGCTTCACTTGCATGATTATGAGGCTGAGTATGAGTTTTACCGGGACCTTGTAGATGGAAACAAGCCTATTCCATTTCTCTCGGACAAGTTCAAGATTCCACCTGTTGTCATGTATCATTGA 1284 0.5164 MPKVPEEKDGSEKETPKISIDPFPHLASTKPYFLPWKPMKRTVRPLFVLLLLLVFIATLTSRAVVGRRLLSIELETRVINHNPPPQLNTTLLHHAAVEIGEAKLRQEIQQLLDGNFGSQARHRTFVSWRRFIHHDVDNRNGLPANLRSPLFYRYWLDFRRVLHDWSRKRRFQPGIMSELTRSVKIPLDRYNNAAAAAGSGEKRYSSCAVVGNSGILLNSNHGSLIDAHEVVMRLNNARVENYEYKVGKKTSISFVNSNILHLCARRAGCFCHPYGPNVPIVMYICQAMHFLDYTVCNGSHRAPLLVTDPQFDVLCARIVKYYSLKRFVEGTGKGLEQWGSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSNSAKHHYHTNQKVELHLHDYEAEYEFYRDLVDGNKPIPFLSDKFKIPPVVMYH* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0971 427 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 38 427 - -
Lja3g0971 427 MobiDBLite consensus disorder prediction 1 19 - -
Lja3g0971 427 Pfam Glycosyltransferase family 29 (sialyltransferase) 195 406 IPR001675 GO:0006486|GO:0008373
Lja3g0971 427 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g0971 427 Gene3D Glycosyl transferase family 29 151 410 IPR038578 -
Lja3g0971 427 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 38 427 - -
Lja3g0971 427 PIRSF Sialyl_trans 323 416 IPR012163 GO:0006486|GO:0008373
Lja3g0971 427 PIRSF Sialyl_trans 39 275 IPR012163 GO:0006486|GO:0008373
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0971 202 371 Glycosyltransferase AT3G48820 23.699 7.24e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0971 K00786 - gmx:100789506 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0971 3 9987142 9989034 Lja3g0971 3 9987142 9989034 ECH