Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0969 ATGGCGCGAGTCGACTTGGACGGAAACCCGATCCCGCCGCTGTCAATATGCCTCATCGGCGGCGGAGGCTTCATCGGATCTCACCTCTGCGAGAAGCTCATGGCCGAAACCTCCCACAAGGCCGTCGTCATCGACGTCTCCTCCGAGAAAATCAATAACCTCCTCGACAAATCTCTCCCCTGGGCTGATCGCATCGAGTTCCATCACATGAACATCAAGAATGATTCTCGCCTCGAAACCCTCGTCAAAGCTTCTGATCTCACGATTAATCTTGCGGCAATTTGTACGCCGGCGGATTACAACACTCGCCCGTTGGATACGATCTACAGCAATTTCATTGATGCGATTCCGGTGATTAAGTTTTGCACTGAGAACAATAAGCGTTTGATCCATTTTTCTACGTGCGAGGTCTTTGGGAAGACCATAGGCAGCTTTCTCCCTGAGGAATATCGGAAGGACCCAAAATATTTCGTACTCAAAGAAGATGAAACTCCTTGTATTTTTGGTCCAATTGAGAAGCAGAGGTGGTCTTATGCTTGTGCAAAGCAAATGACTGACAGGCTAATATATGCTGAGCATGCGGAGAATGGCCTCAAGTTCACCATTGTGAGACCTTATAACTGGATTGGCCCAAGAATGGACTTCATTCCTGGTGTAGATGGCCCAAGTGAGGGTGTCCCTAGAGTCTTAGCCTGCTTCAGTAATAATCTCCTTCGCGGCGAGCCGCTCAAACTTGTGGATGGTGGAAAATCCCAGAGAACCGTTCTCTATATCAAAGATGCAATTGAAGCTGTTATGTTAATGATTGATAACCCTGAGAGAGCAAATGGACATATCTTTAATGTCGGAAACCCAGACAATGAAGCTTCTGTGAAGGAACTTGCTGAGCTTATGATACAGGTTTATGCAAATGTGTCTGGTGTGCCAGCCTCTAGTCTATCAACTCTGGATGTGAGTTCAGAGGATTTCTATGGTAAAGGCTATGATGACAGTGATAGGCGCATCCCTGATATGACACTTATCACCAAGCAGCTTGGTTGGAAGCCAAAGACACCTCTTGATGAACTGTTGCAAGTTACCCTCAAATATCAACATGAGACATATTCTCATGCTATCAAGAAAGAACTCTCAAAACCATCAATTTGA 1146 0.4607 MARVDLDGNPIPPLSICLIGGGGFIGSHLCEKLMAETSHKAVVIDVSSEKINNLLDKSLPWADRIEFHHMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFSTCEVFGKTIGSFLPEEYRKDPKYFVLKEDETPCIFGPIEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRGEPLKLVDGGKSQRTVLYIKDAIEAVMLMIDNPERANGHIFNVGNPDNEASVKELAELMIQVYANVSGVPASSLSTLDVSSEDFYGKGYDDSDRRIPDMTLITKQLGWKPKTPLDELLQVTLKYQHETYSHAIKKELSKPSI* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0969 381 Gene3D - 15 374 - -
Lja3g0969 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 367 IPR036291 -
Lja3g0969 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Lja3g0969 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 380 - -
Lja3g0969 381 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0969 Lja-Chr3 9977590 9980310 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0969 K12449 - gmx:100790039 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0969 3 9977590 9980310 Lja3g0969 3 9977590 9980310 ECH