Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0954 ATGTCGGAAGCACCATTCACACCACGAGAGAAGCTTTTTGAGAAGCAAAAGTATTTTCAGAATATCCAGAAGCATACTTACTTGAAAGGGCGATATGATAAGATTACGTCTGTTGCAATACCAATTGCTTTGGCTGCATCGTCACTTTTTATGATTGGACGAGGGATCTATAACATGTCTCATGGAATAGGAAAGAAAGAATGA 204 0.3873 MSEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSHGIGKKE* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0954 67 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 1 67 IPR039296 -
Lja3g0954 67 Pfam Cytochrome c oxidase subunit VII 10 62 IPR039297 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0954 Lja-Chr3 9778502 9781979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0954 - - rcu:8269644 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0954 3 9778502 9781979 Lja3g0954 3 9778502 9781979 ECH
Lja3g3611 3 71540116 71543028 Lja3g0954 3 9778502 9781979 PCT