Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0949 ATGTCCGACAACCGCCACCGCCCGAGTCCTTCACCACCGGCAATGCCGCCTTCTTCCTGGGCCAAGAAAACCGGCTTCAGGCCCAAATTCTCCGGTGAGACCAATGCCGCTCATTCCGGCCAGATAACCGGACCTCAGCCCAAGCCCAGAGAATCCCAACCCGTCCCTGATCTTGAAATGGGTCGGGTTCGCCCGCCCCCAAACGGAGTCGCACAGGGCCAAAAGGTTCCGGTTCCCGCTAAGGACCAGAGTGTAAAGAAGCGGAGGGATTCTGACGGCGTTCCCAGCACCAACGGCCAGGCAACTCCGGCGGCGGCGGTGGTGGAGGAGCCGTCGCAGCCGCGGAGGACGGCGAGGCATGAGGAATTGGTGGAAGGTTTAACGGTGGATGATGAAGGGTTTGCGTCCAGGCACTTGCATATGAAGTACGAGCTCAGAGATTCACCTGGTTTAGTTCCCATTGGTGTGTATGGTATGCAGCATTACGTTTCGATGTTAGGTTCGTTGATTCTCATTCCACTTGTTATTGTTCCTGCCATGGGAGGAACTCATGAGGAAACTGCTATGGTGGTATCGACCGTGCTCTTTGTCTCGGGGGTGACTACACTCTTGCATATAAATTTTGGGTCCAGGTTGCCCTTAATACAAGGCCCTTCTTTCGTTTATTTGGCGCCGGCTCTGGCTATTATCAACTCCCCTGAGTTTCAAGCATTAAAAGAAAATAAATTCAGGCATATAATGAAGGAGCTGCAGGGAGCTATAATTATTGGATCAGCTTTTCAAGCTTTACTTGGATATTCTGGACTTATGTCGCTTTTAGTAAGATTGATCAATCCAGTTGTTGTAGCCCCGACTATTGCTGCAGTTGGACTTTCGTTTTACAGTTATGGTTTTCCATTAGTGGGTACATGTATTGAGATCGGTGCAGTACAGATATTAGTGGTCATTGTTTTTTCACTTTATCTTCGCAAGATATCGGTTCTTGGACATCGCATATTTCTAGTATATGCGGTTCCTTTGGGTCTAGCAATTACATGGGCATTTGCTTTCTTGCTGACTGAAGCAGGAATATACAGTCACAAAGGATGTGATATAAATGTACCTGCATCCAATATGGTTTCAGAGCACTGCAGAAAGCATTTTTCAAGGATGATCCATTGTCGGGTGGATACTAGTCAGGCATTGAAATCCTCTCCATGGTTTAGATTTCCATATCCACTACAATGGGGTGCCCCTCTCTTCAACTGGAAAATGTCTCTTGTAATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTGGGTCATACCATGCATCTTCATTATTGGTAGCATCCAGACCTCCAACTCCAGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGGTCTACAACTTTAACTGAAAATGTTCACACAATTGCGGTGACTAAAATGGGAAGCCGCAGGGCAGTTCAACTGGGTGCATGCTTTCTGATAGTGTTGTCTCTTGTGGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTTTGCTTTATGTGGGCAATGCTCACAGCTTTGGGCTTGTCAAATCTACGCTACAGTGAGGCTGGAAGCTCTCGCAATATCATCATAGTTGGGTTATCATTGTTCTTCTCTCTTTCGGTGCCTGCTTACTTTCAACAATACGACATCTCTCCAAATTCCAACTTGTCTGTGCCTAGTTACTTTCAGCCCTACATTGTAGCTTCTCACGGGCCTTTCCACTGCAAATATGGAGGGTTGAACTATGTCTTGAACACGCTTCTTTCACTACACATGGTGATAGCGTTTCTTGTTGCTTTTATCCTGGATAATACTGTACCTGGCGGTCGGCAGGAACGTGGGGTATACGTTTGGTCCGAATCTGAGGTTGCTAAAAGAGAGCCTGCTGTTGCCAGTGACTACGAATTGCCCTTAGGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTCTGA 2043 0.4758 MSDNRHRPSPSPPAMPPSSWAKKTGFRPKFSGETNAAHSGQITGPQPKPRESQPVPDLEMGRVRPPPNGVAQGQKVPVPAKDQSVKKRRDSDGVPSTNGQATPAAAVVEEPSQPRRTARHEELVEGLTVDDEGFASRHLHMKYELRDSPGLVPIGVYGMQHYVSMLGSLILIPLVIVPAMGGTHEETAMVVSTVLFVSGVTTLLHINFGSRLPLIQGPSFVYLAPALAIINSPEFQALKENKFRHIMKELQGAIIIGSAFQALLGYSGLMSLLVRLINPVVVAPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVVIVFSLYLRKISVLGHRIFLVYAVPLGLAITWAFAFLLTEAGIYSHKGCDINVPASNMVSEHCRKHFSRMIHCRVDTSQALKSSPWFRFPYPLQWGAPLFNWKMSLVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYDISPNSNLSVPSYFQPYIVASHGPFHCKYGGLNYVLNTLLSLHMVIAFLVAFILDNTVPGGRQERGVYVWSESEVAKREPAVASDYELPLGVGRIFRWVKWVGL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0949 680 Pfam Permease family 156 573 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja3g0949 680 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 21 680 - -
Lja3g0949 680 MobiDBLite consensus disorder prediction 34 48 - -
Lja3g0949 680 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 21 680 - -
Lja3g0949 680 MobiDBLite consensus disorder prediction 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0949 Lja-Chr3 9679419 9686458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0949 14 680 Organic Solute Cotransporters AT2G27810 71.409 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0949 - - gmx:100799537 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0949 3 9679419 9686458 Lja3g0949 3 9679419 9686458 ECH
Lja3g3619 3 71670604 71678068 Lja3g0949 3 9679419 9686458 PCT