Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0941 ATGGATTCCCTGCTTCCAATCTCAACAGCAGTACATGCAGATTCAGAGAAGCAAAATGCTTCTTTAGAAATTCAACAACAAAAGGATAATGTTGATGCAGGCGCTCTCTTTGTCCTCAAATCAAAAGGGTCATGGGTGCATTCTGCTTACCACTTAACAACATCAATTGTGGCTCCACCTCTATTGAGTCTTCCTTATGCATTCACCTTTCTTGGATGGACGGCTGGGATCTTGTGCTTAGTTATTGGAGCTCTTGTCACCTTCTACTCCTACAATTTAATATCTCTTGTTCTTGAGCACCATGCTAAGTTGGGTAATCGTCAGCTCCGATACAGAGACATGGCTCATGATATTCTAGGTCCAAGATGGGGTCGTTATGTTGTGGGGCCGATTCAGTACACAGTCTGCTATGGTGTTGTAGTGGCGTCTACTCTTTTAGGAGGACAATGCATGAAGGCAATTTACATTTTAGCAAATCCAAATGGGACCATGAAGCTTTACGAGTTTGTAACAATATTTGGATTTTTCATGTTGATTTTGGCTCAAGTCCCATCTTTCCACTCATTGAGGCACATCAATCTTGTGTCTTTGGTTCTGTGCTTGGCCTACAGTGCTTGTGTTACTGTTGGTTCCGTATATATTGGAGACTCGTCAAAAGTACCAACAAAAGATTATTCTTTGAAAGGTGATGCTGAGAGTCGCTTATTTGGAATCTTTAATGCTGTTGCCATCATTGCCACAACATACGGAAATGGAATAATTCCAGAAATTCAGGCTACATTAGCACCACCAGTAAAAGGGAAGATGTTCAAGGGACTAAGTGTTTGTTACACTATACTTACAATCACTTTCTTCAGCGTAGCTATATCTGGTTATTGGGCATTTGGCAATGAATCTGAAGGCCTAATCCTAAGCAACTTTGTAGACAATGGGAAGCCTCTAGTGTCCAAGTGGTTCATTTACATGACCAACATTTTCACTATAACACAATTATCAACAGTTGGCGCGGTATACTTGCAACCTATAAATGAAGTGCTGGAGCAAACATTTGGTGACCCGAAAAGCCGTGAGTTCTCGTCCCGCAATGTAATCCCTAGAGTGATTTCGCGGTCCACTGCTGTTGTTGTTGCAACTACTATAGCAGCCATGCTGCCATTTTTCGGGGACATAAATTCGCTTATTGGAGCTTTTGGATTTATGCCACTTGACTTCATTTTGCCAGTGGTTTTCTACAATTTGACTTTTAAGCCATCGAAGAGAAGCCCCATTTTCTGGTTGAATGTAACTATTGTTGTGGTTTTCTCTGCATTAGGAGGTATTGCAGCAGTAGCAGCAGTTAGACAGATAGTACTTGATGCCAAAAGCTATCGATTATTTGCTAATAGGCAAATGGGTACTCTGCTTCCAACCTCAACAGTAGTAAATGAAAATTCAGAGAAGCCAGATGCTTCGCAACAAATTCAACACCAAAAAGATGTTGATGCAGGAGCTCTCTTTGTGCTCAAATCAAAAGGTTCATGGATACACTCTGGTTACCATTTGACAACATCAATAGTGGCTCCAACTCTGTTGAGTCTTCCTTATGCATTCACCTTCCTTGGATGGACAGCTGGTATCTTAAGCTTAGTCATTGGAGCTCTTGTCACTTTCTACTCTTACAATTTAATATCACTTGTCCTTGAACACCACGCTAAGTTGGGTAATCGTCAGCTTCGATTCAGAGACATGGCTCGCGTCATTTTAGGTCCACGATGGGGTCGTTACTTTGTGGGGCCAATTCAGTTCGCAGTCTGTTATGGTGCTGTAGTGGCTTGTACTCTTTTGGGAGGACAATGCATGAAGGCAATTTACCTTTTGGCGAATCCAAATGGGACCATGAAGCTTTACGAGTTTGTAATCATATTTGGATGCTTCATGCTGATTTTAGCTCAAATCCCATCTTTCCACTCATTGAGGCACATCAATCTTGTGTCCTTGGTTCTGTGCTTAGTCTATAGTGCATGTGCTACTGTTGGTTCCATATACATTGGAGACTCATCAAAAGGACCAGAAAAGGATTATTCATTGAAAGGTGATACAGAGAATCGCTTATTTGGAATGTTCAATGCTCTTGCCATCATTGCCACTGCATACGGAAATGGAATAATTCCAGAAATTCAGGCTACATTAGCACCACCAGTAAAAGGGAAGATGTTCAAGGGACTAAGTGTTTGTTACACTGTACTTATAATCACTTTCTTTAGTGTAGCTATATCTGGTTATTGGGCATTTGGCAACAAATCTGAAGGCTTAATCTTAAGCAACTTTGTGGACAATGGGAGGCCTTTAGTGCGCAAGTGGTTTATTAACATGACCAACATTTTCACCATAACACAATTATCAGCAGTTGGTGTGGTGTACTTGCAGCCCACAAATGAAGTGTTGGAGCAAACATTTGGGGACCCAAAAAGCCCTGAATTCTCCTGCCGCAATATGATCCCTAGAGTGATTTCGCGGTCATTATCTGTTGCTATTGCAACCACCATAGCAGCCATGCTTCCATTTTTTGGGGACATAAACTCGCTTATTGGAGCTTTTGGCTTTATGCCACTTGACTTCATTTTGCCAGTGGTTTTCTTCAATTTAACTTTTAAGCCATCTAAGAGAAGTCCCATTTTCTGGTTGAATGTAACCATTGCTGTGGTTTTCTCTGCATTAGGAGGTATTGCAGCAATAGCAGCAGTTAGACAGATAGTACTTGATGCAAAAAATTACCAATTATTTGCTAATGTATGA 2775 0.4115 MDSLLPISTAVHADSEKQNASLEIQQQKDNVDAGALFVLKSKGSWVHSAYHLTTSIVAPPLLSLPYAFTFLGWTAGILCLVIGALVTFYSYNLISLVLEHHAKLGNRQLRYRDMAHDILGPRWGRYVVGPIQYTVCYGVVVASTLLGGQCMKAIYILANPNGTMKLYEFVTIFGFFMLILAQVPSFHSLRHINLVSLVLCLAYSACVTVGSVYIGDSSKVPTKDYSLKGDAESRLFGIFNAVAIIATTYGNGIIPEIQATLAPPVKGKMFKGLSVCYTILTITFFSVAISGYWAFGNESEGLILSNFVDNGKPLVSKWFIYMTNIFTITQLSTVGAVYLQPINEVLEQTFGDPKSREFSSRNVIPRVISRSTAVVVATTIAAMLPFFGDINSLIGAFGFMPLDFILPVVFYNLTFKPSKRSPIFWLNVTIVVVFSALGGIAAVAAVRQIVLDAKSYRLFANRQMGTLLPTSTVVNENSEKPDASQQIQHQKDVDAGALFVLKSKGSWIHSGYHLTTSIVAPTLLSLPYAFTFLGWTAGILSLVIGALVTFYSYNLISLVLEHHAKLGNRQLRFRDMARVILGPRWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYLLANPNGTMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLVYSACATVGSIYIGDSSKGPEKDYSLKGDTENRLFGMFNALAIIATAYGNGIIPEIQATLAPPVKGKMFKGLSVCYTVLIITFFSVAISGYWAFGNKSEGLILSNFVDNGRPLVRKWFINMTNIFTITQLSAVGVVYLQPTNEVLEQTFGDPKSPEFSCRNMIPRVISRSLSVAIATTIAAMLPFFGDINSLIGAFGFMPLDFILPVVFFNLTFKPSKRSPIFWLNVTIAVVFSALGGIAAIAAVRQIVLDAKNYQLFANV* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0941 924 Pfam Transmembrane amino acid transporter protein 42 445 IPR013057 -
Lja3g0941 924 Pfam Transmembrane amino acid transporter protein 504 908 IPR013057 -
Lja3g0941 924 PANTHER OS05G0424000 PROTEIN-RELATED 21 457 - -
Lja3g0941 924 PANTHER OS05G0424000 PROTEIN-RELATED 486 920 - -
Lja3g0941 924 PANTHER GABA TRANSPORTER 1 21 457 - -
Lja3g0941 924 PANTHER GABA TRANSPORTER 1 486 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0941 Lja-Chr3 9573931 9584847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0941 596 924 Organic Solute Cotransporters AT1G08230 66.163 1.43e-148 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0941 - - gmx:100791114 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0941 3 9573931 9584847 Lja3g0941 3 9573931 9584847 ECH