Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0932 ATGAAAGTGAAGTGTGAACACATATTTTATTCAAAAAGAAAAAGAAAGACAAAAGAGAGTTCAAGCCATTTTTTCTTGTCACCACCTTCCTTCTTCCTTCCAGATACAAGCACAGAAGTTTCTAGAACCAAACATACATACATGATATACATTCCTTACCCTGCAAGCAGACGCATGACTTCTAATGGACCCGAATCAGTTGAACCTGAAGAAGTACCACCACCACAGGTACAGAAACCTGGTAGGCAGAAATCAGATGTGGCTTGGGCGCATTGTTACGTAGCTACTGAGGATGGAAAATCTGTTTTGATTTGCTTGTACTGTAATAAAAATATCAAAGGTGGTGGAATTAATAGGATGAAGGCACATTTGGCGCGAGAGTCAGGGCAAATAACAGGATGCCCCAACGTGCCTGATGAAGTTCGAGTGAAAATGAAAGAAAGCATTGATGAATGCCAAGGCAAGAAAAGAAAAGCTGAACAAGAGTATAAGGAAAGTAATTCAATTGATGAGCACTCTATGACACCCGATGAAGAGGTTACAATGCCACGACCACCACCTTCTAAATCTCAAAAGGGGAAGGACACTGGTCGCATATCTGCTTTTTTTGTGCCTAGAACAACTCCAGGAGCTCAACCTACGTTGAAGAGTGTGTTGCAAAGTAAAGAAATTGTGGAGAAGTGTGACCTTGCCATTTCAAGATGGATGATTGATGCTTCTGTGCCATTCAATGCAGTTAATTCTGCATACTTTCAACCTATGATTGATGCTGTTTGTGCCATGGGTTCAGGGTATAAAGCTCCAAACTTTCATAGAGTTCGTGGTTTCTTGTTGAATAAATGGGTTGATGACACAAAGAAACTTGTTGAGAGTTATCGTGAAGTGTGGAAGCGAACTGGTTGCACTCTTATGGCAGACGGGTGGACTGATCGGTGTAGGAGGTCCCTCATTAATTTCTTGGTATATTGTCCTAAAGGCACTGTTTTTCTCAAATCAGTTGATGCTTCTCAGTATGCAAAAACAGCTGAAATGCTTTTTAAGCTCTTTAAGGAAGTTATTTTATATATTGGCCCTGAAAATGTTGTTCAAGTTGTGACAGATAATGCTGCAAACTATGTTGCTGCTGGCAGGTTATTAGAGGCTGAGTTTCCCAAGTTATATTGGTCTCCTTGTGCTGCACACTGTGTTAATTTGATGTTCCAAGACATTGGGAAGCTAGAGGAAGTAGCAGAGACTGTGTCACAAGCTTCTAATATTACCAAGTACATCTATAATCACTGCTTTGCATTGAGCTTGATGAGAAAGCATACAAATAATAGGGAAATTCTTCGTCCAGCCCCAACTCGCTTTGCTACTAATTTTATTGCATTACAGAGTATTTTGGCTCAAATGGAAGCTTTAAGAGCCATGGTGGTAGATAAGGCATGGACAACCTCAACCTATGCTAGAGATACCAAGGCAAAGAAATTTGTGGAGCAAGTCTTAGATTCTGGGTTTTGGAAGAAATGTGCTGATATTGTGAAACTAACTGAGCCACTTGTTAAATTGTTGCGTCTTGTTGACAGTGAAGATAAACCTGCTATGGGTTTTCTTTACCAAGCTTTTTACAAAACTAGAGAGGAGATGGTGAAGAGGTTCCAAAGAAATAAGAAGAAAGTGGAGCCTTACTTGAAAATCATAGATAGTCGTTGGGATTCTCAGCTTCGTAAGAATCTTCATGCTGCAGGTTATTGGTTAAATCCAGGTTGTCGGTTTAATCGTGATGAATTTGAGAAGCATGAGTCCACAATATCTGGCCTTTTAGATGTCATTGATAGGTATTCTTCTGGAGATATTGAGTTGAATGATAGGTTGACAAGTGAGAAGAGATTATTCAAAGATGCTGAGTTAGATTTTGGAAGAAAAAGTGCTATCCGTGAAAGGAGTAAAGTTATGCCAGATCAATGGTGGGAATCTTATGGATGTGGCACACCAAGTTTGCAAAAGATGGCTATCCGTATTTTAAGTCAAACTTGTAGTGCTTCGGGCTGTGAAAGAAATTGGAGTATATTTGAGCACATTCATTCCAAAAAAAGAAATAGATTAGAGCATCACAAACTGAATGATCTTGTCTATGTTCGCTACAACTTGAGGTTACAACAAAGGAACCGGTTGAGGCATCAAAGTTATGATCCCATCAATTTTGAAGTAATTGAAGATCATTCTAATTGGGTTATGGAGGACTCACCGCCATTCTTAACTGTTGAGGAAGTGGATGCATTGCGTAATGACCTTGCCAACATGACCATCCAACCTATTTCTAATGATATTGGTATGCATCTTCAATTTATTATTATTCTGTATTTGTATTTGGAACCACTTGATGTTTATTGTTATCTTACCTTACATTTAAATTCTATTTTTGTTGTAGATCTAAATCTCAGCTTGTTTGATAATGATGATGATGAGGATGCACAAGGTGCAAATGGGAATGAAAGTAATGCTGGAGAAACTTTCAGTTTATTTGATGATGAAGTGATGCCTTCCTTGGATGAAGCTTTGCCTCCCTTTCCTACTTGGACATGA 2565 0.3899 MKVKCEHIFYSKRKRKTKESSSHFFLSPPSFFLPDTSTEVSRTKHTYMIYIPYPASRRMTSNGPESVEPEEVPPPQVQKPGRQKSDVAWAHCYVATEDGKSVLICLYCNKNIKGGGINRMKAHLARESGQITGCPNVPDEVRVKMKESIDECQGKKRKAEQEYKESNSIDEHSMTPDEEVTMPRPPPSKSQKGKDTGRISAFFVPRTTPGAQPTLKSVLQSKEIVEKCDLAISRWMIDASVPFNAVNSAYFQPMIDAVCAMGSGYKAPNFHRVRGFLLNKWVDDTKKLVESYREVWKRTGCTLMADGWTDRCRRSLINFLVYCPKGTVFLKSVDASQYAKTAEMLFKLFKEVILYIGPENVVQVVTDNAANYVAAGRLLEAEFPKLYWSPCAAHCVNLMFQDIGKLEEVAETVSQASNITKYIYNHCFALSLMRKHTNNREILRPAPTRFATNFIALQSILAQMEALRAMVVDKAWTTSTYARDTKAKKFVEQVLDSGFWKKCADIVKLTEPLVKLLRLVDSEDKPAMGFLYQAFYKTREEMVKRFQRNKKKVEPYLKIIDSRWDSQLRKNLHAAGYWLNPGCRFNRDEFEKHESTISGLLDVIDRYSSGDIELNDRLTSEKRLFKDAELDFGRKSAIRERSKVMPDQWWESYGCGTPSLQKMAIRILSQTCSASGCERNWSIFEHIHSKKRNRLEHHKLNDLVYVRYNLRLQQRNRLRHQSYDPINFEVIEDHSNWVMEDSPPFLTVEEVDALRNDLANMTIQPISNDIGMHLQFIIILYLYLEPLDVYCYLTLHLNSIFVVDLNLSLFDNDDDEDAQGANGNESNAGETFSLFDDEVMPSLDEALPPFPTWT* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0932 854 Pfam hAT family C-terminal dimerisation region 642 710 IPR008906 GO:0046983
Lja3g0932 854 MobiDBLite consensus disorder prediction 59 82 - -
Lja3g0932 854 SUPERFAMILY Ribonuclease H-like 292 714 IPR012337 -
Lja3g0932 854 ProSiteProfiles Zinc finger BED-type profile. 83 141 IPR003656 GO:0003677
Lja3g0932 854 MobiDBLite consensus disorder prediction 148 196 - -
Lja3g0932 854 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 64 755 - -
Lja3g0932 854 PANTHER OSJNBA0013A04.12 PROTEIN 64 755 - -
Lja3g0932 854 Coils Coil 142 169 - -
Lja3g0932 854 MobiDBLite consensus disorder prediction 148 178 - -
Lja3g0932 854 Pfam Protein of unknown function (DUF 659) 268 419 IPR007021 -
Lja3g0932 854 Pfam BED zinc finger 87 126 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0932 Lja-Chr3 9473701 9477558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0932 - - ahf:112722138 1016.91