Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0913 ATGGCTTCAGCATTTCCTTCACTCTCTTCCACCTCTTCTTCATTCCTGCACCACTGTTTCACCGCAAACCCGAAGCTCCTTACTCAATTCCCCATCAATGGTTCGAGCCTTTCGGTTTTTGCTCAAAAGAAGACCAAGAAAACTCGAAAGATTATCTTGAAGGAAGATGTGGTTGATGTGGGAAAGAAAGGGGAGCTTCTTGATGTTAGGGCTGGGTTTTACAGAAATTTCCTGCTTCCCAATGGTCATGCACTGCTTTGCACTCCTCAATTGCTCAAGGAAATGAAGGTAGAAGACGAAAGAATTGAGGCTGAGAAAAGACGGGTAAAAGAAGAGGCACAGCAACTCGCTCTAATTTTTGAAACTGTTGGAGCTTTCAAGGTGAGGCGTAAAGGTGGGAAAGGAAAGCAAATTTTTGGAAGTGTTACGGCTCAAGATCTTGTTGACATAATCAAGGCACAACTTCAAAGGGACGTGGACAAGAGAATTGTTGATCTTCCAGAGATCCGGGAAACAGGAGAATATATTGCAGAAATAAAGCTTCACCCAGAAGTTACAGCTAAAGTGAGGGTGACTGTTTATGGTAACTAA 591 0.4315 MASAFPSLSSTSSSFLHHCFTANPKLLTQFPINGSSLSVFAQKKTKKTRKIILKEDVVDVGKKGELLDVRAGFYRNFLLPNGHALLCTPQLLKEMKVEDERIEAEKRRVKEEAQQLALIFETVGAFKVRRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKRIVDLPEIRETGEYIAEIKLHPEVTAKVRVTVYGN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0913 196 Coils Coil 92 115 - -
Lja3g0913 196 Pfam Ribosomal protein L9, N-terminal domain 50 95 IPR020070 -
Lja3g0913 196 Gene3D - 110 195 IPR036791 -
Lja3g0913 196 Pfam Ribosomal protein L9, C-terminal domain 111 193 IPR020069 -
Lja3g0913 196 TIGRFAM L9: ribosomal protein bL9 50 193 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lja3g0913 196 ProSitePatterns Ribosomal protein L9 signature. 61 88 IPR020070 -
Lja3g0913 196 SUPERFAMILY Ribosomal protein L9 C-domain 105 195 IPR036791 -
Lja3g0913 196 Hamap 50S ribosomal protein L9 [rplI]. 49 196 IPR020594 GO:0003735|GO:0005840|GO:0006412
Lja3g0913 196 Gene3D - 50 109 IPR036935 -
Lja3g0913 196 PANTHER 50S RIBOSOMAL PROTEIN L9 2 196 IPR000244 GO:0003735|GO:0005840|GO:0006412
Lja3g0913 196 SUPERFAMILY L9 N-domain-like 50 105 IPR009027 -
Lja3g0913 196 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 2 196 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0913 K02939 - gmx:100500390 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0913 3 9309687 9312925 Lja3g0913 3 9309687 9312925 ECH